Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1183 ATGGCGGAGAAGCACTTGCGGGAGCTCCTTAAAGAGGATCAAGAACCCTTCCTTCTGAAACACTACATTTGGGAGCGTCGCAGGCAGCTCAAAAGACCTTCCCCAAACAGCACTTTACAACAACAACTGAAAAAGAAAAACTCAAACTTCCCACTTAACAAATGCTTCCTCACTTCCCTACAAAACGCCACAAAATCCCCACTCTTATTGTCTCCAAAGAATAGTACTTCTCCCCTCCTCAGACCCTCCAACGCCAAAACCGCGTCGCTCCTCCTCGAAGCCGCCCTCAGAATCCACAACAAAAACGCGAAACCGAAGAAGCCCAAACCAAACAGCGCCTTGGGCATCTTCGGCTCGCTCTTCAAGAAACTAACCAACCGAAAGAGGGAAACATTAGAGGGTGTTCTTGTTAAGGTTAAAGACAGCGACGACGATGTTGTTGTGGTGGGATCCTGTGAGGTTGGGTTCAGTTGTTCCTGCAACGGAAGGCCAAGCAGTGCTGTGTGGTCGGAGAGCAACGAGGATAAATCGTTGGACTTGGAATCTTCTAGTAGTGGCCACTCATTTGATGACTCTGTTGCTGAAGAGATTGAGTTTCTCAACAAACGCAAACATGTTACGGATTCTGCTTGTTTTGACGACGATGATGGCTTCTTCTGTGAAAGCCCGTTCCGTTTCTCCCTCCAACGCAGCCCCGGCTACTCCGGCCGCCACACCCCGGATTTTTCTTCGCCGGCTGCGTCTCCATGTCGCCGCAAAACTGAGGACAAAAAAATTAATGGTGCTGATGGCGTCAACAAATTCCAATCAGGGGAAGAAGAGGAAGATAAGGAACAGTGCAGTCCAGTATCTGTTTTAGACCCACCCTTCGATGACGATGATGATGGGCATGATGATGACCATGAAGGGGATGGTTTTGATTTGGACTGTAGCTATGCCAATGTACAAAGAACTAAGCAGCATCTACTAAACAGACTTCGTAGATTCGAGAAACTTGCCGAGTTAGATCCGGTAGAACTTGAGAAGAGAATGCTGGATCAAGACCGCGAGTACAAAACATTTACTGAAGAGGACGATGATTGTGAAGACGGCGCCAGCGAAACAGCATGCAAAGAAAATGCTCTGAGAGGAGAATTAATGTTTGAAATCCTCTGCCATTCAAGTGTTGAAGACACACAACAGCAAACTCCAGAAGACCTCAAGAGGCTGGTCTATGATCTCATCAAGGAGGAAGAGAGGGAAGTTAATAATTCTTCAGACATGGTGATAAGAAGGGTTCTTAGGAGGCTAGAATTGTGGAAAGAAGTGGAGTCCAACACTATTGATATGATGATAGAAGAGGACTTCTCTAGAGAGCAATGCAGGTGGAAGAAAAATGCTGAGCACACAAGTGAGCTAGCTGTGGAACTTGAACTTGCTATCTTTTGCTTTCTAGTGGAGGAGCTTTCAGAGGAACTAGTGTGTTAA 1467 0.4663 MAEKHLRELLKEDQEPFLLKHYIWERRRQLKRPSPNSTLQQQLKKKNSNFPLNKCFLTSLQNATKSPLLLSPKNSTSPLLRPSNAKTASLLLEAALRIHNKNAKPKKPKPNSALGIFGSLFKKLTNRKRETLEGVLVKVKDSDDDVVVVGSCEVGFSCSCNGRPSSAVWSESNEDKSLDLESSSSGHSFDDSVAEEIEFLNKRKHVTDSACFDDDDGFFCESPFRFSLQRSPGYSGRHTPDFSSPAASPCRRKTEDKKINGADGVNKFQSGEEEEDKEQCSPVSVLDPPFDDDDDGHDDDHEGDGFDLDCSYANVQRTKQHLLNRLRRFEKLAELDPVELEKRMLDQDREYKTFTEEDDDCEDGASETACKENALRGELMFEILCHSSVEDTQQQTPEDLKRLVYDLIKEEEREVNNSSDMVIRRVLRRLELWKEVESNTIDMMIEEDFSREQCRWKKNAEHTSELAVELELAIFCFLVEELSEELVC* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1183 488 MobiDBLite consensus disorder prediction 288 302 - -
Gso13g1183 488 MobiDBLite consensus disorder prediction 231 305 - -
Gso13g1183 488 MobiDBLite consensus disorder prediction 250 281 - -
Gso13g1183 488 PANTHER - 1 488 - -
Gso13g1183 488 Coils Coil 312 332 - -
Gso13g1183 488 PANTHER OS04G0572500 PROTEIN 1 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1183 Gso-Chr13 26651247 26655297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1183 3 487 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 30.624 2.29e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1183 - - gmx:100782984 874.389