Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1174 ATGATGGAAATGCCTGCCAGAAGATCCAACTACTCGCTCCTCAGCCAAATTCCCGACGACCAGTTCTCCGCCTCCGCCGCCCCCTCCTCCTCCGGCGACGGCAAGTCCGCCCGCGCCGGTAAGTCCGACCGCGCCGCCTTCGACTGGGACCTCGTCGCCGATCACCGGGCCGCCAACCGGATCGGAAACCTCTACTCCTCGATCGGCCTGCAGCGCCAGTCCAGCGGGAGCAGCTACGGCGAGAGCTCGCTCTCCGGCGGCGGCGACTTTTATGCTCCGACGCTCTCCACGGCGGCGGTCAGCGACGTCGACGCCTTCGGATACCTCCACGACGAGCGGAGCAAGTTCTCGGAGGTGGCGCCGGCGAGGATCGCCGGCTCCTCCTCCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGCTACCAGCTGCAGCTTGCGCTCGCACTGCGCCTCTCGTTGCACGCCACGTGCGCTGATGATCCCAATTTCCTCGATCCGGTGCCGGACGACGCCGCGCCGCGGCTCTCGTCGTCGGCCGAGGCGGTTTCGCATAGGTTTTGGGTGAATGGCTGCCTATCATACTCTGACAAAATTCCAGATGGCTTTTACCTGATTCATGGGATGAATTCCTTTGTCTGGACCTTGTGCACTGATCTGCATGAAAATGGCCGAATTCCATCAGTTGATATGCTGAAGTCTGTGAATCCCTGCGTCGTTTCTTCACTTGAAGTAGTTATGGTGGATCGATGCAGTGACCCCAGCTTAAGAGATCTGCAAAATAATGTTCATAACATTTCTTGTACTAGCATAACAACAACAGATGTTGTAGATAAACTTTCCAAGCTGGTTTGCAACCGTATGGGTGGTTCAGCTTCTGTTGGGGAAGATCACTTTTTTTCCATCTGGAGGGATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTATTCCCATAGGTAGTCTATCTGTTGGCCTCTGCCGGCATCGTGCTATATTATTCAAAGTACTAGCTGACGCCATTGATTTACCATGTCGAATTGCTAAGGGCTGTAAATATTGCAAAAGGGATGATGCTACATCTTGTCTTGTTCGATTTGGGCTTGAGAGGGAGTATCTTGTTGATTTAATTGGAAAGCCAGGAAACTTATCTGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCACGACTTAAACCGGCTGAACCTACCATTGATTTCAGGTCATTGGCCAAACAGTATTTCTCGGATTGTGTGTCTCTTGAGCTTGTCTTCGACAACAACTCTGCAGAACAGTTTGATGGGAAGTGCAAAGACAGCAGTAACCCTAGGCCAATTTCGTCTGATAGCAATAGAAGTTCTCACCTTCCTCTGCATCCTCAAGATTCTCATCCAAGCTCACGTGAACAAGGTTCTGAAACATATCAATCATGTAACGCTCCTCAGAACATTGTAGACTCAACTCTGGGAAAGTATCCACCACCAATAAAGCATAAGCGTCCTGCTGGTATACCAACCCCATTAGCACTTACAAATACTAATGATGACATGATTGAGGGCAAGAGGTTTGTTGAAGGAAGTCAACTGATTCCTAGCAAACATGCTCGAGAGCTTAACTTTGACATGGAGGATTTGGACATACCATGGAGTGATCTTGTCCTAAGAGAGAAAATAGGGTCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAACAGGATTTTCATGCTGAGCGCTTCAAGGAATTCCTAAGGGAGGTTGCAATAATGAAACGTTTACGGCATCCAAACATTGTTTTGTTTATGGGGGCAGTCACTCAGCCTCCTAACTTATCAATTGTCACGGAATATTTATCTAGGGGTAGCTTATATAGGCTTTTGCATAGATCTGGCGCCAAAGAAGTATTGGATGAGAGGCGTAGGCTTGGTATGGCTTATGACGTGGCAAAGGGGATGAATTATCTTCATAAACGTAATCCCCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTTGTGATTTTGGGCTTTCACGTCTGAAGGCCAATACGTTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAGGTTCTTTGTGATGAGCCATCGAATGAGAAGTCCGATGTTTACAGCTTTGGTGTAATCTTATGGGAGCTTGCAACATTGCAACAGCCATGGGTTAATTTAAATCCAGCACAGGTTGTGGCAGCTGTTGGCTTTAAGAGAAAAAGGCTTGAGATCCCACATGATGTGAATCCCCAAGTAGCTGCGCTAATTGAGGCTTGCTGGGCCTATGAGCCTTGGAAACGTCCTTCTTTTGCGAGTATTATGGATTCTTTGAGGCCATTGCTCAAACCCCCTACACCTCAACCTGGTCGTCCAAGCATGCCATTACTGACCTGA 2511 0.4886 MMEMPARRSNYSLLSQIPDDQFSASAAPSSSGDGKSARAGKSDRAAFDWDLVADHRAANRIGNLYSSIGLQRQSSGSSYGESSLSGGGDFYAPTLSTAAVSDVDAFGYLHDERSKFSEVAPARIAGSSSGKSWAQQTEESYQLQLALALRLSLHATCADDPNFLDPVPDDAAPRLSSSAEAVSHRFWVNGCLSYSDKIPDGFYLIHGMNSFVWTLCTDLHENGRIPSVDMLKSVNPCVVSSLEVVMVDRCSDPSLRDLQNNVHNISCTSITTTDVVDKLSKLVCNRMGGSASVGEDHFFSIWRDCSNDLKDCLGSVVIPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDATSCLVRFGLEREYLVDLIGKPGNLSEPDSLLNGPSSISFSSPLRFPRLKPAEPTIDFRSLAKQYFSDCVSLELVFDNNSAEQFDGKCKDSSNPRPISSDSNRSSHLPLHPQDSHPSSREQGSETYQSCNAPQNIVDSTLGKYPPPIKHKRPAGIPTPLALTNTNDDMIEGKRFVEGSQLIPSKHARELNFDMEDLDIPWSDLVLREKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHRSGAKEVLDERRRLGMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLCDEPSNEKSDVYSFGVILWELATLQQPWVNLNPAQVVAAVGFKRKRLEIPHDVNPQVAALIEACWAYEPWKRPSFASIMDSLRPLLKPPTPQPGRPSMPLLT* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1174 836 PRINTS Tyrosine kinase catalytic domain signature 636 649 IPR001245 GO:0004672|GO:0006468
Gso13g1174 836 PRINTS Tyrosine kinase catalytic domain signature 677 695 IPR001245 GO:0004672|GO:0006468
Gso13g1174 836 PRINTS Tyrosine kinase catalytic domain signature 724 734 IPR001245 GO:0004672|GO:0006468
Gso13g1174 836 PRINTS Tyrosine kinase catalytic domain signature 743 765 IPR001245 GO:0004672|GO:0006468
Gso13g1174 836 PRINTS Tyrosine kinase catalytic domain signature 787 809 IPR001245 GO:0004672|GO:0006468
Gso13g1174 836 MobiDBLite consensus disorder prediction 442 486 - -
Gso13g1174 836 CDD STKc_MAP3K-like 568 816 - -
Gso13g1174 836 Pfam Protein tyrosine and serine/threonine kinase 563 816 IPR001245 GO:0004672|GO:0006468
Gso13g1174 836 MobiDBLite consensus disorder prediction 451 486 - -
Gso13g1174 836 MobiDBLite consensus disorder prediction 498 521 - -
Gso13g1174 836 Pfam Ethylene-responsive protein kinase Le-CTR1 179 384 - -
Gso13g1174 836 Gene3D Phosphorylase Kinase; domain 1 555 640 - -
Gso13g1174 836 SMART serkin_6 562 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1174 836 SUPERFAMILY Protein kinase-like (PK-like) 540 815 IPR011009 -
Gso13g1174 836 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 121 826 - -
Gso13g1174 836 Gene3D Transferase(Phosphotransferase) domain 1 641 825 - -
Gso13g1174 836 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 121 826 - -
Gso13g1174 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
Gso13g1174 836 ProSiteProfiles Protein kinase domain profile. 562 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1174 836 ProSitePatterns Protein kinases ATP-binding region signature. 568 589 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1174 Gso-Chr13 26515349 26524932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1174 2 829 MAP Kinase Kinase Kinase AT5G03730 64.733 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gso13g1174 PK_Tyr_Ser-Thr 1.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1174 K14510 - gmx:100800648 1668.29