Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1163 ATGGAACCCAATGGGCTAGGTAGTGGAATGTTCTCTGGGTTGGTAGGAGTGGAAAACCCTTTACAACAACAGCAGCAACAACAACAACAACAACAACAACAAAACCTTCACCATTTGCAACACCACCACCCTCAAATGGTTCCCTATGCCACACACCATGACACTGAAAACCCTCATCATCCACACCTTCACCAATCAATCAAACAAGGGTACCCTCCCTTTTCATCCCAGACCAAACAACAACAATCTCCTCTCAGTGATGATGATGAGCCAGGGTTCCCTGCTGATGAGGACCCCAAGAGAAAGGTCTCGCCATGGCAGAGAATGAAGTGGACTGACACCATGGTGAGGCTCTTGATAATGGCGGTTTATTACATTGGTGATGAGGCTGGCTCTGAAGGGACTGATAAGAAGAAGTCATCTGGTTTGATGCAGAAGAAAGGGAAGTGGAAATCGGTTTCAAGGGCTATGATGGAGAAGGGGTTCTATGTTTCTCCTCAGCAGTGTGAGGACAAGTTCAATGACTTGAACAAGAGGTACAAGAGGGTGAATGACATTCTTGGCAAAGGAACTTCCTGCAGGGTTGTGGAGAATCAGAGTTTGTTGGATTCAATGGACTTGTCTCCAAAGATGAAAGAGGAGGTTAAGAAGTTGCTCAATTCCAAGCACTTGTTCTTCAGGGAAATGTGTGCTTACCATAACAGTTGTGGACATGGGAATAACAATGCTCCACAGCAAGGAGAGTCTGGGGGTGAAGTGTCTCAGCCTCAGGCTCAACCTCATCATCATCAGCAGCAGCAACAACAACCGCAACAACGATGTTTTCATTCATCAGAGGTTGGGAATTTGGGGGGTTCAGGTGTTGAGGGTTTGAGGATGTTGAAAGTGGGAAATGGGGAAGAGGGTGATGATGACTCCGAGGATGATGATGTCTCAGAGGAAGATTCGGACGAGGACGAAGATGATTCGGGAGAAGGTGGTTCAAGGGGTCATGTGGGGCATGGACATGAAGATATTGAGGATGAGAATGATGGAAGGTCAATGAGAAAGAGGGCAAGGAAAGTAGGAGGGGTTTCTATGTCACCACAGTTGATGCAACAACTGAGTGCTGAGGTGAGTGGTGTGTTCCAAGATGTAGGTAAGAGTGCTTGGGACAAGAAGCAATGGATGAGGAGCAGGATAATGCAGTTGGAGGAGCAGCAAATAAGCTACCATACTCAAGCTTTTGAGTTGGAAAAACAAAGATTAAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGACAGCCAAACTTGAAAATGAACGCAGGAGGCTTGAGAATGAGAGAATGGTTTTGCTCATTCGCCAGAAGGAATTTGAATTGATGAGTCTTCAACACCAACAACAGCAGCAGCATCAACAACAACATTCTTCCACCTAG 1428 0.4622 MEPNGLGSGMFSGLVGVENPLQQQQQQQQQQQQQNLHHLQHHHPQMVPYATHHDTENPHHPHLHQSIKQGYPPFSSQTKQQQSPLSDDDEPGFPADEDPKRKVSPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDKKKSSGLMQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTSCRVVENQSLLDSMDLSPKMKEEVKKLLNSKHLFFREMCAYHNSCGHGNNNAPQQGESGGEVSQPQAQPHHHQQQQQQPQQRCFHSSEVGNLGGSGVEGLRMLKVGNGEEGDDDSEDDDVSEEDSDEDEDDSGEGGSRGHVGHGHEDIEDENDGRSMRKRARKVGGVSMSPQLMQQLSAEVSGVFQDVGKSAWDKKQWMRSRIMQLEEQQISYHTQAFELEKQRLKWARFSSKKEREMETAKLENERRRLENERMVLLIRQKEFELMSLQHQQQQQHQQQHSST* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1163 475 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 474 - -
Gso13g1163 475 PANTHER F16F4.11 PROTEIN-RELATED 1 474 - -
Gso13g1163 475 MobiDBLite consensus disorder prediction 47 63 - -
Gso13g1163 475 MobiDBLite consensus disorder prediction 324 351 - -
Gso13g1163 475 MobiDBLite consensus disorder prediction 240 358 - -
Gso13g1163 475 MobiDBLite consensus disorder prediction 301 323 - -
Gso13g1163 475 MobiDBLite consensus disorder prediction 17 40 - -
Gso13g1163 475 MobiDBLite consensus disorder prediction 69 87 - -
Gso13g1163 475 MobiDBLite consensus disorder prediction 240 279 - -
Gso13g1163 475 MobiDBLite consensus disorder prediction 1 105 - -
Gso13g1163 475 Coils Coil 424 451 - -
Gso13g1163 475 Pfam Myb/SANT-like DNA-binding domain 108 231 IPR044822 -
Gso13g1163 475 Gene3D - 111 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1163 Gso-Chr13 26320585 26322595 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso13g1163 Myb_DNA-bind_4 5.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1163 - - gmx:100816661 816.224