Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1152 ATGCTTCAAAATTGTGGATGGAATCAACCACGTTATCCTCTCAATATTTTCTCTCTTTCCTCTCTAACCAAAAACAAAAAGAAAAGGAAGCTAACTAAACAAAATTCTGATCTCACTGTACAGTATCAACCAAACCAACAATCCAACACCATGAAACTCTCTGTGTTCCACCATCAGCACCATCCTATGATTCTCAATTGCCCCCTTACCTTGACAAGGACACACAAAAGACTTTACAACAATGGTTCATATAGGTGGTTACCATGCCACTGCTCACATTCTTCCACAAGTAAAACTGCTGCAGAACCAGTTACAGTTTCTTTAAGTATTGAAGGAAGGAGAGCATTACTCAGTTGTCTCCTCACAACTGTTGCTGGAGTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCCAAAATTCCTGAAAGTGATTATACAACCTTGCCCAATGGTTTGAAGTACTATGATTTGAAGGTTGGGAATGGAGCTGAAGCTAAAATGGGATCCCGTGTTGCAATTCATTATGTCGCCAAATGGAAGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGCCAATCTGAGAGAGGAACAGTCCTTAAAGGGTTGGATTTAGGAGTACAAGGCATGCGAGTAGGAGGCCAGCGGCTGTTAATTGTTCCTCCTGAACTTGCCTATGGAAGCAAAGGAGTCCAAGAAATCCCTCCCAATTCAACAATAGAGTTGGACATTGAATTGCTTTCTATCAAACAAAGTCCATTCGGGACTCCCGTAAAGATAGTTGAAGGTTAA 852 0.4225 MLQNCGWNQPRYPLNIFSLSSLTKNKKKRKLTKQNSDLTVQYQPNQQSNTMKLSVFHHQHHPMILNCPLTLTRTHKRLYNNGSYRWLPCHCSHSSTSKTAAEPVTVSLSIEGRRALLSCLLTTVAGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNGAEAKMGSRVAIHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1152 283 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 172 267 IPR001179 GO:0003755
Gso13g1152 283 Gene3D - 136 274 IPR046357 GO:0003755
Gso13g1152 283 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 59 283 - -
Gso13g1152 283 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 59 283 - -
Gso13g1152 283 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 176 270 IPR001179 GO:0003755
Gso13g1152 283 SUPERFAMILY FKBP-like 147 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1152 Gso-Chr13 26192611 26197423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1152 165 269 Calmodulin-binding Proteins AT5G48570 32.727 5.51e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1152 - - gmx:100815603 562.377