Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1146 ATGGGCACAATGTTGGTGCCTCCATGGCTTGAGCCACTCCTAAACACATCCTTCTTCGATGTGTGTCGGATTCACGGAGATGCCGCGAGGAGCGAATGTAACATGTTTTGTCTCGACTGCAATGAGAATGCGTTTTGCTTCTATTGCCGTTCCTCAAAACACAAGGATCACCAAGTTATTCAGATACGGAGATCTTCGTATCACGATGTAGTGAGGGTGGCGGAAATTCAGAAAGTGTTGGACATTAGTGGAGTTCAAACATATGTGATCAACAGTGCCAGGGTTTTGTTTCTGAATGAGAGGCCTCAACCAAAGTCTGGAAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGGTGTAAGCTTGTAGGAATAAAGAGAAATGGGGATGCAAGTTTTGCTTTGGATGCTAAAAATGAGGCATCAACAATGGAGGGCATGTCAAGGAGATCGGTTTCTTCAAGACATCATCAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGATATGTACCCGGCCACGCCTTCTCCACCTGCTTCTTCAAACGCAAGGAGAAGAAAAGGGATTCCTCATAGGGCACCTTTTGGCTCCTAA 630 0.4556 MGTMLVPPWLEPLLNTSFFDVCRIHGDAARSECNMFCLDCNENAFCFYCRSSKHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRNGDASFALDAKNEASTMEGMSRRSVSSRHHQEEELREGSQQDMYPATPSPPASSNARRRKGIPHRAPFGS* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1146 209 MobiDBLite consensus disorder prediction 162 178 - -
Gso13g1146 209 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 208 - -
Gso13g1146 209 SMART bboxneu5 17 62 IPR000315 GO:0008270
Gso13g1146 209 MobiDBLite consensus disorder prediction 152 209 - -
Gso13g1146 209 SUPERFAMILY B-box zinc-binding domain 20 64 - -
Gso13g1146 209 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 208 - -
Gso13g1146 209 Pfam PLATZ transcription factor 63 134 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1146 Gso-Chr13 26120883 26123061 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso13g1146 PLATZ 1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1146 - - gmx:100779070 421.779