Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1143 ATGCCTTCCTCACTCTCCCTCTCACTCACACCCCTCTCTGTGTTCCCTCCCCGCAGAGTCCCCACTCCTTCTCCAAAACCCTATCGCCTCTCCGTCAAATCCTCCATCAACAAACCCCCTGACGCCGGCACCACCAAGCCCAGCTCCTGGCTCAGCCCCGACTGGCTCACTTCCCTCTCCCGCTCCCTCACCGCCGGCAACGACGTCTCCGGCATCCCCGTCGCCTCCGCCAAGCTCGACGACGTCTCCGATCTCCTCGGCGGCGCCCTCTTCCTCCCGCTCTTCAAGTGGATGCAGGACTACGGCCCCATCTACCGCCTGGCCGCCGGCCCCCGAAACTTCGTTGTGGTTAGCGACCCTGCCATTGCCAAGCACGTGCTCAGGAACTACGGTAAATATGCTAAAGGTCTCGTTGCTGAGGTCTCGGAGTTCCTGTTCGGGTCCGGTTTCGCCATCGCCGAAGGTCCTCTCTGGACGGCAAGGCGCAGGGCTGTGGTTCCATCTCTTCATAAACGGTACTTGTCTGTTATAGTGGATAGGGTGTTTTGTAGATGTGCTGAGAGATTAGTGGAGAAGCTACAACCTGATGCACTTAATGGAACTGCTGTTAACATGGAGGCGAAGTTTTCGCAGTTGACTCTTGATGTTATTGGTTTATCTGTATTTAACTATAACTTTGACTCGCTCAACACGGACAGTCCTGTTATTGAGGCTGTTTACACTGCATTAAAAGAGGCAGAGGCTCGATCAACCGATCTTTTACCCTATTGGAAGTTTAAATTTCTTTGTAAGATAATTCCGAGACAAATAAAGGCTGAAGAGGCTGTTAGCGTTATCAGGAAAACTGTTGAAGATCTTATTGAAAAATGTAGAGAGATTGTAGAATCTGAGGGTGAAAGAATTGATGTCGAGGAATATGTGAATGACAGTGACCCTAGTATCCTCCGGTTCTTGCTTGCCAGCAGAGAAGAGGTTTCCAGTGTGCAATTAAGGGATGATCTTTTGTCACTATTAGTTGCTGGTCATGAGACCACCGGTTCAGTGCTGACCTGGACACTTTATCTTCTAAGCAAGGATTCTTCGTCATTGGCAAAAGCACAAGAAGAGGTAGACAGAGTTTTACAGGGAAGGCGTCCTACCTATGAAGATATTAAAGATCTTAAGTTCTTGACACGCTGCATTATTGAGTCACTCCGTCTCTATCCTCATCCTCCGGTATTGATAAGAAGAGCTCAAGTTCCTGATGAGCTTCCAGGTGGTTACAAACTCGATGCTGGTCAAGATATTATGATCTCTGTATACAACATACATCGTTCTTCTGAGGTCTGGGATAGGGCTGAAGAGTTTGTGCCAGAAAGATTTGATTTGGATGGTCCAGTTCCAAATGAAACAAATACAGATTTCAGATTCATTCCATTCAGTGGAGGCCCCCGCAAATGTGTTGGTGATCAGTTTGCTTTAATGGAAGCTATAGTTGCTCTTGCAATCTTTCTACAACACATGAACTTCGAACTTGTTCCTGATCAGAATATCAGTATGACAACAGGAGCAACAATACATACGACGAATGGCTTGTACATGAAACTGAGTCGACGGTTGAAATAG 1605 0.4785 MPSSLSLSLTPLSVFPPRRVPTPSPKPYRLSVKSSINKPPDAGTTKPSSWLSPDWLTSLSRSLTAGNDVSGIPVASAKLDDVSDLLGGALFLPLFKWMQDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGKYAKGLVAEVSEFLFGSGFAIAEGPLWTARRRAVVPSLHKRYLSVIVDRVFCRCAERLVEKLQPDALNGTAVNMEAKFSQLTLDVIGLSVFNYNFDSLNTDSPVIEAVYTALKEAEARSTDLLPYWKFKFLCKIIPRQIKAEEAVSVIRKTVEDLIEKCREIVESEGERIDVEEYVNDSDPSILRFLLASREEVSSVQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDRVLQGRRPTYEDIKDLKFLTRCIIESLRLYPHPPVLIRRAQVPDELPGGYKLDAGQDIMISVYNIHRSSEVWDRAEEFVPERFDLDGPVPNETNTDFRFIPFSGGPRKCVGDQFALMEAIVALAIFLQHMNFELVPDQNISMTTGATIHTTNGLYMKLSRRLK* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1143 534 Coils Coil 526 534 - -
Gso13g1143 534 SUPERFAMILY Cytochrome P450 86 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PANTHER CYTOCHROME P450 FAMILY 4 110 532 - -
Gso13g1143 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Gso13g1143 534 Gene3D Cytochrome P450 73 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 MobiDBLite consensus disorder prediction 1 49 - -
Gso13g1143 534 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 Pfam Cytochrome P450 94 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso13g1143 534 PANTHER CAROTENE EPSILON-MONOOXYGENASE, CHLOROPLASTIC 110 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1143 Gso-Chr13 26070434 26077439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1143 17 532 Cytochrome P450 AT3G53130 81.346 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1143 K09837 - gmx:100803324 1037.71