Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1124 ATGCTATCATTGCCTTTCATACACCATGTTATCACAGGTCGTTGGTTCATGATCTTCGCATCATGTCTCATCATGGCTGTTTCTGGAGCAACCTACATGTTTGGTTTGTACTCAAACGAGGTCAAAACCTCTCTGGGGTATGACCAGTCAACGCTCAACTTGATAAGCTTCTTCAAGGACCTTGGTGCCAACCTTGGAATTTTCTCAGGCTTGATCAATGAGATAAGCCCTCCATGGGTGATACTAGCCATGGGAGCCACCATGAACTTCATTGGCTACTTCATGATATGGCTCTCTGTCACTTCACGCATTGCCAAACCCCAAGTGTGGCAAATGTGTCTGTATTTTTACATTGGTGCCAATTCTCAGTCTTTTGCCAACACTGGTGCTTTGGTTAACTGTGTCAAGAGCTTCCCAAGAAGTCGTGGAAGTGTCATTGGTCTTCTTAAGGGTTATGTGGGTCTAAGTGGTGCTATTTTCACTCAGTTTTACCATGCCTTCTATGGTGATGACTCTAAGGCTCTTATTTTCCTCATTGGGTGGCTTCCTGCTGCTATTTCCTTCGTTTTCCTTCCAACGGTTAGGGTGTTGAGTATAACCCCACAACCCAAAGAGATCAAGGTTTTCTACCAGCTTCTTTATATCTCACTTGGGGTTGCAGGGTTTCTCATGGTGTTGATTATTATACAAAACAAGTTGAGTTTCACAAGGGTGGAGTACATAGGGGATGGCATGGTGGTTCTTTTATTACTTCTTCTCCCACTTGGTGTTGTGTTTAGTGAAGAATTCAAACTTTGGAAGAACCAAAACCAAAACCAAACATTCACTAATCATGCAGGTGCTGCTTCAGTTGTTGAATTGCCACAGCCAGAAGAAGCACATGCAGTAGCACCAACTCATTCAGAAAGGAAAAACAACAACTCGTGCTTGAAGAACGTTTTCAAGCCTCCAAAAAGGGGTGAGGACTACACCATCTTCCAAGCCCTCTTCAGCATTGACATGCTGATTCTGTTCATTGCAACAGTTTTTGGTGTTGGTGGAACATTGACAGCACTTGACAATTTAGGACAGATTGGGAACTCATTGGGGTACCCCAGAAAGAGCCTCACAACTTTTGTGTCCCTTGTGAGCATATGGAACTATTTGGGACGAGCATCTTCTGGCTTTGCCTCTGAGTACTTATTGATCAAATACAAGTTCCCTCGTCCCTTGTTGCTCACTCTAGTCATGCTTCTCTCTTGTGTTGGCCACATTCTAATTGCTTTTGGTATCCCAAACTCTCTTTACTTCTCCTCAGTGATTATTGGGTTTTGCTTTGGGGCCATATGGCCCTTAATGTTTGCCATCATATCTGAAATATTTGGCCTCAAATACTACTCCACTTTGTACAATTTTGGGGCAGTGGCAAGCCCTGTTGGCTCTTACATTCTCAATGTGAAAGTGACTGGTTATTTGTATGATAAAGAGGCTTTGAAGCAGTTGGGGGTGAAGGGACTCATAAGGCAAAAGGGGAAGGACCTAACTTGCGTTGGAGTGCAATGCTATAGGATGGCTTTTCTCATTATCACTGCTTCAACTTTGGTTGGATGTGTTGTTTCTTTTATTCTTGTGTTGAGGACTAGAAATTTTTACAAAGGTGACATTTATGAGAAGTTCAGAGTTCTTGAACTAGACACAGGAGAGAGTCTTCCAACTTTTGGCAGCACTAGTGGCACCACCACTACCACAAACCGCGTGGAAGAACAAGATAAAATCAATAGGAAATAA 1767 0.4301 MLSLPFIHHVITGRWFMIFASCLIMAVSGATYMFGLYSNEVKTSLGYDQSTLNLISFFKDLGANLGIFSGLINEISPPWVILAMGATMNFIGYFMIWLSVTSRIAKPQVWQMCLYFYIGANSQSFANTGALVNCVKSFPRSRGSVIGLLKGYVGLSGAIFTQFYHAFYGDDSKALIFLIGWLPAAISFVFLPTVRVLSITPQPKEIKVFYQLLYISLGVAGFLMVLIIIQNKLSFTRVEYIGDGMVVLLLLLLPLGVVFSEEFKLWKNQNQNQTFTNHAGAASVVELPQPEEAHAVAPTHSERKNNNSCLKNVFKPPKRGEDYTIFQALFSIDMLILFIATVFGVGGTLTALDNLGQIGNSLGYPRKSLTTFVSLVSIWNYLGRASSGFASEYLLIKYKFPRPLLLTLVMLLSCVGHILIAFGIPNSLYFSSVIIGFCFGAIWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYILNVKVTGYLYDKEALKQLGVKGLIRQKGKDLTCVGVQCYRMAFLIITASTLVGCVVSFILVLRTRNFYKGDIYEKFRVLELDTGESLPTFGSTSGTTTTTNRVEEQDKINRK* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1124 588 Gene3D MFS general substrate transporter like domains 323 543 IPR036259 -
Gso13g1124 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 578 - -
Gso13g1124 588 PANTHER MFS TRANSPORTER 6 578 - -
Gso13g1124 588 CDD MFS_Mch1p_like 13 530 - -
Gso13g1124 588 SUPERFAMILY MFS general substrate transporter 14 543 IPR036259 -
Gso13g1124 588 Pfam Nodulin-like 14 258 IPR010658 -
Gso13g1124 588 MobiDBLite consensus disorder prediction 566 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1124 Gso-Chr13 25854609 25856935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1124 9 553 Nodulin-like Gene Family AT2G39210 64.014 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1124 - - gmx:100814000 1133.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1539 19 44319871 44321977 Gso13g1124 13 25854609 25856935 PCT
Gso3g1559 3 41529709 41531959 Gso13g1124 13 25854609 25856935 PCT
Gso19g1555 19 44498453 44501759 Gso13g1124 13 25854609 25856935 PCT
Gso13g1124 13 25854609 25856935 Gso19g1539 19 44319871 44321977 PCT
Gso13g1124 13 25854609 25856935 Gso3g1559 3 41529709 41531959 PCT
Gso13g1124 13 25854609 25856935 Gso19g1555 19 44498453 44501759 PCT