Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1116 ATGAAGTCAAGATTTCTTAGAGGGTGCCTTAACAAGTGCAAGAAAATGTGCCTAAACAAGTGCATATCTTGTGAGGACTGTTGTGAATGGGCTTTGTGGTCTTCTTCTTTGCATGAAGCTTGCTCCAACATTCCAAGTGATGTTCCAAAGGGTCACTTGGTTGTGTATGTGGGAGAAAACCACAAGAGATATGTGATCAAGGTTTCATTGCTCCACCATCCACTCTTCAGGGCCTTGTTGGATCAAGCTCAGGAAGAGTATGACTTTATTGCTGATTCAAAACTCTGCATTCCCTGTGATGAACACCTCTTCCTTAGTGTACTTCGATGTGCTAGCTCCCCACAGAACCAACGAGTGTGTCTGTGTCTTTGA 372 0.4382 MKSRFLRGCLNKCKKMCLNKCISCEDCCEWALWSSSLHEACSNIPSDVPKGHLVVYVGENHKRYVIKVSLLHHPLFRALLDQAQEEYDFIADSKLCIPCDEHLFLSVLRCASSPQNQRVCLCL* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1116 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 123 IPR003676 GO:0009733
Gso13g1116 123 Pfam Auxin responsive protein 36 110 IPR003676 GO:0009733
Gso13g1116 123 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1116 Gso-Chr13 25733306 25733969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1116 33 118 Calmodulin-binding Proteins AT4G34750 46.739 1.60e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1116 K14488 - gmx:100812927 256.144