Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1115 ATGAATGAACGAGGGCATGAGATGGATCGGGAAGAATATTTGCGGAAGTGTTCCAATATGAAATGCCAAAGAGTTCAGGTGGATGAATCATTTGTACCTGCTCTTCAAGATGAAGTAATGGAAGTTGAGCATTTGCTTGCAGAACCTAGAAACGTTCATGCTTCCCTGGATGGTAGTTTGGATTCTCATACAACTTTGAATGACAAGGATGATTTGGAACTGGAGGTCCTTGATGGATTGCTGGATGATGTTGAAATTGATGATCTTGAAGGAACTGGTGGTTTTGCTGGTGCATGTGAAGAATATTTTTTGGATTTTGGATTTGCCGACAAATTTGAGGAGGTACTAGGCTCAGGTCCTTTTGAAGGTTCACTCTTGCAAATTTCAAGTTCTGAAAGTCATTCTTCCGGATTAAGCGGAAGTAGCATTGTTGGTGGGGTTTTAGAATCAACCAAAGTACCTATTGCAAAATCTGAATGCAAAAATGATTCTCTAGATGAGACAATAACCTATGAAGCACATGGTGCCTTCAGGAACAATCCAAGTCAACCATCAAAAGTAAATTGCAGATACAACATTTCACTTGATATACAACATCTGCAAGAGTTGGATAACAATAGTCATTTAGCTGCTGGTATATTGACTTGTAAGAAGGGAAAAGGTCCTGTTGAAAAAGGCCAACCTGCTGTACTTAGAGAGAAGAGATTCCGAAAGCCTACCCAGAGGTACATTGAAGAATTTTCAAATTCAAGGTCAAAGGAAAAGGCACCAACTGCTGTTACAAAAACTGAACATTTAAGTGACTCATCATGTGATGTACTTCATATAAGAATTAAAGCATTGAAAAAGAGTCCAAGCGAGAAGTCTAGTAATGAAAATAGTGATGTGATGCTTCCTGAGTTGCAAGTTCGCAAAAGGCGTCTGGAGAAAGAGAAACTTGAGTATGACAAGGAGTTATTTCCCTCGGAATCCGAGGATGAATGTTCAACATCAAAAAGATCTAGAAGGAAAGATCGAAGAAAGCATCAGAAGATGTGGACTCTCCCTGAAGTGTTGAAGTTGGTTGAAGGCATATCTGAATATGGAGTTGGTCGATGGACTGACATAAAGAGGTTTCTGTTTTCTTCTTCAAGCTACCGAACTCCCATAGATCTCAGGGACAAGTGGCGGAACCTTTTGAGAGCCAGTTCTGCACAGAAAACCTCGAGAGAGGCTGAGCAAAATGACGAGCTTGCCCTGCGTCCCTTGCCATTTAATGTGGTACATCGTGTGCGAGAATTGGCTAAAATTCACCCATACCCAAGGCAACGTGGGTCAAAGAGGTTGCGTGTTAGCCAAGCTGGCTCTTCTATCATTGCTAAAGATTCTCCTCCCCTTAGTCTTAGCAAAAGAAATGTACGTAGGAAGTTTACTTAG 1416 0.4103 MNERGHEMDREEYLRKCSNMKCQRVQVDESFVPALQDEVMEVEHLLAEPRNVHASLDGSLDSHTTLNDKDDLELEVLDGLLDDVEIDDLEGTGGFAGACEEYFLDFGFADKFEEVLGSGPFEGSLLQISSSESHSSGLSGSSIVGGVLESTKVPIAKSECKNDSLDETITYEAHGAFRNNPSQPSKVNCRYNISLDIQHLQELDNNSHLAAGILTCKKGKGPVEKGQPAVLREKRFRKPTQRYIEEFSNSRSKEKAPTAVTKTEHLSDSSCDVLHIRIKALKKSPSEKSSNENSDVMLPELQVRKRRLEKEKLEYDKELFPSESEDECSTSKRSRRKDRRKHQKMWTLPEVLKLVEGISEYGVGRWTDIKRFLFSSSSYRTPIDLRDKWRNLLRASSAQKTSREAEQNDELALRPLPFNVVHRVRELAKIHPYPRQRGSKRLRVSQAGSSIIAKDSPPLSLSKRNVRRKFT* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1115 471 Pfam Myb-like DNA-binding domain 345 393 IPR001005 -
Gso13g1115 471 Gene3D - 331 444 - -
Gso13g1115 471 ProSiteProfiles Myb-like domain profile. 338 393 IPR001005 -
Gso13g1115 471 CDD SANT_TRF 344 394 - -
Gso13g1115 471 SUPERFAMILY Homeodomain-like 345 412 IPR009057 -
Gso13g1115 471 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 337 397 IPR017930 -
Gso13g1115 471 SMART sant 342 395 IPR001005 -
Gso13g1115 471 Coils Coil 298 318 - -
Gso13g1115 471 PANTHER TRF-LIKE 8 15 469 - -
Gso13g1115 471 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 15 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1115 Gso-Chr13 25724001 25729480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1115 344 393 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 2.59e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1115 - - gmx:100810255 841.262