Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1105 ATGACCTGTCCAAATAATGTCATTAATCATGAACGCAATGTATGTATGGCAAGAGCCACAAGCAAGCGTGCAAGGTTCTCACACGGTCAAGAAATTTCGTGGATGTTTCTTCATCATCTCAATATAAATAGCCAATCTCTACCCAAAGACACCCAATCTCAAACTTTGCAAACTTTATCACGAAGAAATTCGCATTGTTCAGTCTTCGATTTCAAGATGATTAGGTCTTTTGTTGAGAAGATTGAAAAGGGTCTCTCACTAATTGTGCCCAAAAAGCCTGAACTCAGCTACTTCAATGAAAATCAAGTGGAAACCACAACAAATGTTGTGCCAGATGATGTTAGTAAGGGATATTTTGCAGTTGTTGCAATCAAAGATGGAGAAATCAAAAGGTTTGTTGTTGAGTTAGACTACTTGGCAAATCCTGCATTCTTGGGACTGTTGGATCAAGCTGGAGAAGAGTATGGCTTCAAACAGCAGGGAACTCTAGCAGTTCCTTGTCGGCCTCAAGAATTACAGAAAATCTTAGATGGTTGGAGAGTGATACCGGACAACATCAAAGGTGCAGGAAGGGATATTTATTTTCCCAAGTTCCTATGA 600 0.3983 MTCPNNVINHERNVCMARATSKRARFSHGQEISWMFLHHLNINSQSLPKDTQSQTLQTLSRRNSHCSVFDFKMIRSFVEKIEKGLSLIVPKKPELSYFNENQVETTTNVVPDDVSKGYFAVVAIKDGEIKRFVVELDYLANPAFLGLLDQAGEEYGFKQQGTLAVPCRPQELQKILDGWRVIPDNIKGAGRDIYFPKFL* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1105 199 PANTHER SMALL AUXIN-UP RNA-RELATED 71 195 - -
Gso13g1105 199 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 71 195 IPR003676 GO:0009733
Gso13g1105 199 Pfam Auxin responsive protein 108 176 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1105 Gso-Chr13 25596043 25596829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1105 111 176 Calmodulin-binding Proteins AT3G43120 39.394 1.78e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1105 - K14488 gmx:106795483 407.527