Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1101 ATGCTTAGGAATTTTGTTGGGAGGATACAAAAGGGTCTTTCACTGTTTGTAGCAAGAAGGCCTGCTGCATTCAGCTACTTCAGTGAAGATCGTGCCACAACCGCGGCACCGGATGATGTTAAGGAAGGCTATTTTGCTGTTCATGCAATTAAGGGTGAGGAAACCAAGAGGTTTATTGTTGGGTTAGATTACTTGAATGATCCTGCATTCTTGGGACTTCTGGACCAAGCTCAAGAAGAGTTTGGTTTCAGGCAAAAGGGAGCTCTTGTACTCCCTTGTTGCCCTCAAGAGTTACAGAAGATTCTAAATGGTCCCAAAGCATAG 324 0.4444 MLRNFVGRIQKGLSLFVARRPAAFSYFSEDRATTAAPDDVKEGYFAVHAIKGEETKRFIVGLDYLNDPAFLGLLDQAQEEFGFRQKGALVLPCCPQELQKILNGPKA* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1101 107 Pfam Auxin responsive protein 31 102 IPR003676 GO:0009733
Gso13g1101 107 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 106 - -
Gso13g1101 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1101 Gso-Chr13 25556384 25556707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1101 13 93 Calmodulin-binding Proteins AT3G43120 36.471 5.69e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1101 - K14488 gmx:100797479 218.009