Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1100 ATGCTTAGATCTTTGCTTGGGAGGATAAAAAAGGGTCTCTCACTGTTTGTAGCTAGAAGGCCTACATTCAACTACTTCAGTGAAGATCATGCCGCAACCGCGGCGCCAGATGATGTTATGGAAGGCTATTTTGCTGTTCTTGCAATCAAAGGAGAAGAAACCAAAAGGTTTATTGTTGGGTTAGACTACTTGAATGATCCTGCATTCTTGAGACTTCTGGACCAAGCTCGTGAAGAGTATGGTTTCAGACAGAAGGAAGCTCTTGCACTCCCTTGTTGCCCTCAAGAGTTACAAAAGATTCTAGATGCTCCAAAATCATAG 321 0.4299 MLRSLLGRIKKGLSLFVARRPTFNYFSEDHAATAAPDDVMEGYFAVLAIKGEETKRFIVGLDYLNDPAFLRLLDQAREEYGFRQKEALALPCCPQELQKILDAPKS* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1100 106 Pfam Auxin responsive protein 31 102 IPR003676 GO:0009733
Gso13g1100 106 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 105 - -
Gso13g1100 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1100 Gso-Chr13 25553406 25553726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1100 6 92 Calmodulin-binding Proteins AT4G34750 35.556 1.10e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1100 - K14488 gmx:100808634 214.157