Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1065 ATGAAACGACGTCGTTTTAAGAAAAATAAAAAAATAAGTGTGCTTTACCCAAATTCAAATTCAAATTCAAATTCTGAGAAAAACTCCAACGAACTTCGCATTTCCACGAAAATGGCTTCCCAAAACCCAGCGGAGGAAGAAAATTCAAAGCGACATTGGTCCCTTGAAGACTTCGAGATCGGAAAACCTCTCGGTAGGGGCAAATTCGGTAGAGTTTACGTCGCCAGAGAAGTTAAGAGCAAATTTGTTGTGGCGTTGAAGGTTATATTTAAGGAACAAATTGATAAGTACAGAATTCATCACCAACTGAGGAGAGAGATGGAGATACAGACCAGTCTCCGGCACGCAAATATCCTGCGTCTTTACGGTTGGTTTCATGATGCTGACCGTGTTTTCTTGATTCTTGAGTATGCTCATAAGGGAGAGCTTTACAAGGAGCTGAGAAAAAAGGGTCATCTCACTGAGAAGCAAGCTGCCACGGGGCGTCTTAAAATTGCAGACTTTGGTTGGTCTGTTCAGTCTAGAAGCAAAAGACATACCATGTGTGGAACATTGGATTATTTAGCACCAGAAATGGTTGAAAACAAAGCTCATGACTATGCAGTTGACAACTGGACTTTGGGTATCCTTTGTTATGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAATCTGATACCTTCAAAAGGATAATGAAGGTTGATCTAAGCTTCCCTTCCACCCCTTCTGTCTCTATAGAGGCGAAAAATCTGATTAGTCGGCTCCTGGTGAAAGACTCCTCACGAAGGCTCTCTCTTCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAGATTTTGTGGGTATTTGCTAG 864 0.4201 MKRRRFKKNKKISVLYPNSNSNSNSEKNSNELRISTKMASQNPAEEENSKRHWSLEDFEIGKPLGRGKFGRVYVAREVKSKFVVALKVIFKEQIDKYRIHHQLRREMEIQTSLRHANILRLYGWFHDADRVFLILEYAHKGELYKELRKKGHLTEKQAATGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGAPPFEAESQSDTFKRIMKVDLSFPSTPSVSIEAKNLISRLLVKDSSRRLSLQKIMEHPWIIKNADFVGIC* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1065 287 MobiDBLite consensus disorder prediction 13 32 - -
Gso13g1065 287 CDD STKc_Aurora 57 277 - -
Gso13g1065 287 SUPERFAMILY Protein kinase-like (PK-like) 43 280 IPR011009 -
Gso13g1065 287 MobiDBLite consensus disorder prediction 1 32 - -
Gso13g1065 287 PIRSF ILK 157 280 - -
Gso13g1065 287 PIRSF ILK 25 160 - -
Gso13g1065 287 ProSiteProfiles Protein kinase domain profile. 58 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1065 287 Gene3D Phosphorylase Kinase; domain 1 46 141 - -
Gso13g1065 287 ProSitePatterns Protein kinases ATP-binding region signature. 64 91 IPR017441 GO:0005524
Gso13g1065 287 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 161 282 IPR030616 GO:0004672
Gso13g1065 287 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 18 160 IPR030616 GO:0004672
Gso13g1065 287 Pfam Protein kinase domain 58 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1065 287 Pfam Protein kinase domain 160 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g1065 287 Gene3D Transferase(Phosphotransferase) domain 1 158 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1065 Gso-Chr13 25111521 25114479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1065 15 282 CBL-interacting serine-threonine protein kinases AT5G25110 32.026 2.00e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Gso13g1065 Pkinase 2.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1065 K08850 - gmx:100800111 547.74