Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1064 ATGGCCACCACCACTACCCAGCCTCCCTCTAATATCTGTTTTTTCCTTCTGTTGTTGCTTCTAGCACACTTTAATTTGGGCATAAGCCAACTTGAGCTGAATTACTACTCTAAAAGCTGCCCAAAAGCTGAAGAGATCATCAAGGAACAAGTCACACAACTATATAACAAGCATGGAAACACTGCCGTTTCGTGGGTCAGAAATCTCTTCCACGATTGCGTGGTTAAGTCATGCGATGCATCATTACTGTTAGCGACGGTGAGAGATGTAGTGTCGGAGCAGACATCGGATAGAAGTTTTGGGATGAGAAACTTCAAGTACGTAAACACTATCAAAGCAGCGGTTGAGAAAGAATGCCCCTTCACAGTGTCATGCGCTGACATTGTTGCTCTTTCTGCCAGAGATGCCATTGCTTTGTTGGGAGGACCAAGCATTGAAATGAAGACAGGGAGAAAGGACAGCAAAGAAAGCTATGCAATGGAGGTGGAAGACTTGATTCCAAACCACAATGATTCCATGTCCTCAGTGCTGTCTCGTTTTCAAGCCATTGGCATTGACGTTGAAGCCACAGTCGCTCTTTTAGGAGCTCACTCAGTGGGAAGAGTTCACTGCAAGAATCTGGTGCACAGATTATACCCCACCATAGATTCAACACTGGACCCTGCACATGCTGAGTACCTAAGACGTCGGTGCCCAACACCCAATCCCGATCCAAAAGCTGTTCTGTATTCAAGGAATGACCTTAAAACGCCAATGATCATTGACAACAACTACTACAAGAACATCTTGCAACACAAGGGTCTTCTCACTGTGGATGAAGAGCTTGCCACTGACCCAAGAACCGCATCTTATGTCCAAAAGATGGCCAATGACAATGAATATTTCAACCAACAGTTCTCAAGGGCCATAATTTTGTTATCGGAGACAAATCCTTTAACAGGAGATGAAGGAGAAATCAGAAAGGATTGTCGCTACCTCAATGCCAATTAG 990 0.4465 MATTTTQPPSNICFFLLLLLLAHFNLGISQLELNYYSKSCPKAEEIIKEQVTQLYNKHGNTAVSWVRNLFHDCVVKSCDASLLLATVRDVVSEQTSDRSFGMRNFKYVNTIKAAVEKECPFTVSCADIVALSARDAIALLGGPSIEMKTGRKDSKESYAMEVEDLIPNHNDSMSSVLSRFQAIGIDVEATVALLGAHSVGRVHCKNLVHRLYPTIDSTLDPAHAEYLRRRCPTPNPDPKAVLYSRNDLKTPMIIDNNYYKNILQHKGLLTVDEELATDPRTASYVQKMANDNEYFNQQFSRAIILLSETNPLTGDEGEIRKDCRYLNAN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1064 329 ProSiteProfiles Plant heme peroxidase family profile. 30 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 Pfam Peroxidase 48 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 Gene3D Peroxidase, domain 2 167 306 - -
Gso13g1064 329 Gene3D - 34 327 - -
Gso13g1064 329 CDD secretory_peroxidase 30 324 IPR033905 GO:0004601|GO:0042744
Gso13g1064 329 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PANTHER PEROXIDASE 25-RELATED 16 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 SUPERFAMILY Heme-dependent peroxidases 30 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso13g1064 329 PANTHER PEROXIDASE 21 16 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1064 Gso-Chr13 25098374 25101833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1064 33 327 Peroxidase AT2G37130 76.351 1.07e-173 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1064 K00430 - gmx:100785485 649.047