Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1063 ATGGCCGACGACTTCGAATTCTCCGACAAAGTCCCTCCTTCCTTCGATCGCGTGGGTTCAAAAGGGTTCAACCCAGCATTAATTGTTCTCCTTCTTGTTGGTGGGTTGCTGTTGATATTCCTCGTTGGAAATTATGTACTATACACATATGCACAGAAGACCCTCCCTCCTAGAAAAAAAAAGCCAATCTCAAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAGGGCGTCTCTGCACCTGGAGAGTAG 249 0.4578 MADDFEFSDKVPPSFDRVGSKGFNPALIVLLLVGGLLLIFLVGNYVLYTYAQKTLPPRKKKPISKKKMKKERLKQGVSAPGE* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1063 82 PANTHER DNA-BINDING PROTEIN S1FA2 3 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gso13g1063 82 Pfam DNA binding protein S1FA 19 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gso13g1063 82 MobiDBLite consensus disorder prediction 59 82 - -
Gso13g1063 82 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1063 Gso-Chr13 25087515 25090069 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Gso13g1063 S1FA 1.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1063 - - gmx:100500343 145.206