Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1038 ATGGCATCTCTTGGCGTGCGACCAGTTCTTCCCCCTCCATTAACTTCCATCTCCGACCCACCTCCTCTTTTCGATGGCACCACCAGGTTGTACATCAGTTATTCTTGCCCCTATGCACAACGTGTGTGGATCGCTAGGAACTACAAGGGGCTACAAGATAAGATCAATTTGGTCCCTATTAACCTTCAAGACAGGCCAGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTGCCATCCTTGGAGCACAATGGCAAGGTGTTGGGAGAAAGTCTTGATTTGATCAAATATGTAGATGCAAACTTTGAAGGGACACCTTTGTTTCCCAGTGATCCTGCCAAGAAAGAGTTCGGTGAGCAATTGATATCCCATGTTGATACATTCAGCAAAGACCTGTTCGTTTCATTGAAAGGGGATGCTGTACAGCAAGCCAGTCCCGCTTTTGAATACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCTTGCTTGGCCAATTCAGTTTGGTGGATATTGCTTATATTCCATTTGTTGAAAGATTCCAAATTGTCTTTGCTGAGGTGTTCAAACATGACATCACAGAAGGAAGGCCTAAACTTGCAACATGGTTTGAGGAGTTGAATAAGCTAAATGCTTATACCGAGACTAGAGTCGATCCTCAGGAGATCGTTGATCTTTTCAAGAAACGCTTCCTGCCTCAACAGTGA 714 0.4412 MASLGVRPVLPPPLTSISDPPPLFDGTTRLYISYSCPYAQRVWIARNYKGLQDKINLVPINLQDRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGTPLFPSDPAKKEFGEQLISHVDTFSKDLFVSLKGDAVQQASPAFEYLENALGKFDDGPFLLGQFSLVDIAYIPFVERFQIVFAEVFKHDITEGRPKLATWFEELNKLNAYTETRVDPQEIVDLFKKRFLPQQ* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1038 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Gso13g1038 237 Gene3D - 105 236 - -
Gso13g1038 237 SUPERFAMILY Thioredoxin-like 21 108 IPR036249 -
Gso13g1038 237 CDD GST_C_Lambda 112 230 - -
Gso13g1038 237 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Gso13g1038 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Gso13g1038 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 236 IPR044629 GO:0004364
Gso13g1038 237 SFLD Main (cytGST) 29 210 - -
Gso13g1038 237 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 236 - -
Gso13g1038 237 Pfam Glutathione S-transferase, C-terminal domain 141 207 - -
Gso13g1038 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Gso13g1038 237 Gene3D Glutaredoxin 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1038 Gso-Chr13 24794791 24797671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1038 11 234 Glutathione S-transferase Gene Family AT5G02790 66.964 6.47e-116 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1038 K00799 - gmx:547597 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1472 19 43572228 43574184 Gso13g1038 13 24794791 24797671 PCT
Gso3g1486 3 40785186 40788232 Gso13g1038 13 24794791 24797671 PCT
Gso13g1038 13 24794791 24797671 Gso19g1472 19 43572228 43574184 PCT
Gso13g1038 13 24794791 24797671 Gso3g1486 3 40785186 40788232 PCT