Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1036 ATGATGGTTAGATCGTGTTGGAAGCCTATTGCTGATGGTGATGAAGGAGATGGGAGTGGGAGAGTTGATGGACTTCTATGGTACAAGGATTTGGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTGGTTCAGGCCAATAGTTCATTAGAGGATCGAGGTGAACTAGAGTCTGGACCATTGGGTTCTAATCACTTGGGTCCTCAAGGGACCTTTATAGGTGTTTATGATGGCCATGGTGGAAGTGAGGCCTCACAGTTTGTTAGTGACAATCTCTTCTGCAATCTCAAAAGGCTCGCAGCTGAACATCAAGGTGTGTCAGAACATGTTATCAAAAGGGCTTACTCAGCAACAGAGGAGAGTTTTCTGTCTCTTGTGAAGAAACAGTGGCTGAGTAAGCCACAGATTGCATCCACTGGCACTTGTTGTTTGGTGGGGGTAATTTGCAATGGCATGATATATGTTGCAAATTCTGGAGACTCCCGGGTGGTGCTAGGAAGATTAGAGAGAGCAACAAGGGAAACAGAAGCTATACAATTATCTACAGAACACAATGTTAACCAAGAATCAGTGAGAGATGAACTTCGGTCAAAGCACCCCTTTGATTCACAAATCGTGGTTTTGAGACAAAACGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCACGATCCATAGGGGATGCATATCTGAAGAAAGCAGAATTCAACAGGGATCCTCTACCAGCCAAGTATAGACTAGCAGAAACATTCTTCAGGCCAATTCTTAGTTGTGAGCCATCAACATCATCCCACACACTCCACCCTGATGATCAATTTCTCATATTTGCTTCTGATGGCTTATGGGAGCATCTTACCAACCAAGAGGCTGTTAACATAGTCAGCAACAACCCACCTAACGGAATTGCTAGAAGACTTGTGAAAGCTGCACTTAGAGAAGCAGCTAAGAAGTGTGAAATGAGACTTTCTGACCTCCAAAAGATTGAGCAAGGGATGAGGAGACACATCCATGATGACATAACAGTGATTGTGGTGTTTCTCAATCCCAAACTCACTGAGAATACTTCTCTCTGTGGTTCTCCTCTTTCAATCAAGGGAGGTGGGTCTACCAATTCCTAG 1116 0.4427 MMVRSCWKPIADGDEGDGSGRVDGLLWYKDLGNHLYGEFSMAVVQANSSLEDRGELESGPLGSNHLGPQGTFIGVYDGHGGSEASQFVSDNLFCNLKRLAAEHQGVSEHVIKRAYSATEESFLSLVKKQWLSKPQIASTGTCCLVGVICNGMIYVANSGDSRVVLGRLERATRETEAIQLSTEHNVNQESVRDELRSKHPFDSQIVVLRQNVWRVKGLIQVSRSIGDAYLKKAEFNRDPLPAKYRLAETFFRPILSCEPSTSSHTLHPDDQFLIFASDGLWEHLTNQEAVNIVSNNPPNGIARRLVKAALREAAKKCEMRLSDLQKIEQGMRRHIHDDITVIVVFLNPKLTENTSLCGSPLSIKGGGSTNS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1036 371 Gene3D - 29 355 IPR036457 -
Gso13g1036 371 Pfam Protein phosphatase 2C 58 315 IPR001932 -
Gso13g1036 371 SMART PP2C_4 32 344 IPR001932 -
Gso13g1036 371 CDD PP2Cc 36 346 IPR001932 -
Gso13g1036 371 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 369 - -
Gso13g1036 371 PANTHER ALPHABET, ISOFORM E-RELATED 3 369 - -
Gso13g1036 371 SUPERFAMILY PP2C-like 64 347 IPR036457 -
Gso13g1036 371 Coils Coil 307 327 - -
Gso13g1036 371 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Gso13g1036 371 ProSiteProfiles PPM-type phosphatase domain profile. 46 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1036 Gso-Chr13 24771863 24774601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1036 2 367 PP2C-type Phosphatase Gene Family AT3G12620 63.957 8.36e-178 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1036 K01102 - gmx:100819870 749.584