Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1024 ATGAGATTGGTTTGCTTCGAGCCGAAAACGCAGTCGTTTTCCTTTTCCCGCCACACTCGGCCAGCATCGAGTTCAACTGCTTCACCTTCTTCCACCAGCGCGAACGAGAGCTTTGACTTTGAAGAAGCAGAAGCTCTGATACTAAAATGGAACCCTGAAACCTCTGCGTACGGAAGAGTAACCTCTCTCTTCTACAACGACAAAGCAGAGGCCATGCACTACATCCACTGCGTTAACATGCTTCAGAAAACCATGCACTCTTTGATCTCACAGAACTCTTCCTCGCCAAAACTCATTCTCGCGCATAACCTTATGCAAATTGCCATGAAGAGACTCCAGAAAGAGTTCTACCAGATATTATCAATGAACCGGGCCCACCTCAACCCCGAATCCGTCTCCACCAGATCCTCCACCACTTCAAGAACCTCTTTCTGTTCCGACAGTTACGACGACGCCACTGCCGAAGAAGATGTTCGCCAATCAGGGGATTGTATCTCCGAAGTCGAACGCGTTTCTTCTGAAGCCATGGCGGATCTCAAATCCATCGCTGACTGCATGATTTCCAACGGCTACGCGAAGGAATGTATCAGCGTGTACACGACGATGAGAAAATCGATCGTTGACGAAGGCATTTATCGCCTCAACGTGGAGCAGTTGAGCGCTTCGAAGGTTAACAAGATGCACTGGGATGTGCTCGAGTTTAAAATCAAGAGCTGGTTGGAGGCGGTTAAGATCGCCGTGAGGACGCTCTTCGCCGGAGAGAGGATCCTCTGCGATCACGTCTTCGGTGCGTCGCAATCCATCAGAGAAGTTTGCTTCGCTGATATTTCTAGAAGCGGAGCATCTCTTTTGTTCGGATTCCCCGAACTCGTCGTGAAGACGAAGAAATCGCCGCCGGAGAAGATCTTCCGGATGATTGACATGTACGCGGCAATCGCCACGCTGTGGCTGGAGATCGAATCGATATTCTCGCTCGATTCAACAACCGCTGTTAAATCTCAAGCCTACGGTCTTCTTCTCCGACTCTCAGAGTCCGTACGAACGAGTCTATTGGAGTTTGTGACCGCAATTCAGAAAGGCTCGCCCAAATCGACGGCGAACTTCGCCGGCGTGCATTCCTTGACAGTGCAAGTGATGAATCACTTGACTACTCTCGCGGATTATAGCAACGTGCTCTCGGAAATTTTCTTAGACGTGCCACCGCCGCCGAGGTCGCCGTTGCCGGAATCTTACTTATACAGTCCGGAATCCGACGACACCACGACGACGGAGACGGAGTTCTCAGTGCAGATGGCGCGGCTTATTCTCGTCCTTCTCTGCAAGATCGACGGCAAATCGAGGCATTACAAGGAAGTTTCGTTGTCTTACCTGTTTCTCGCGAACAATCTCCGGCACGTGGTGGCGAAGGTCCGTGCCTCGAACTTGCATTATGTTCTCGGCGACGATTGGGTGATGAATCACGATGCGAAGGTGAAGCGGTTGACGGCGAACTACGAGAGAGTGGCGTGGGGCAAAGTGTTTTCGTCTTTGCCGGAAAATCCAACGGCGGAAATGTCGCCGGCGGAGGCGAGGGTTATGTTCGGGAATTTCAATTTTGAATTCGAGAAAGCTTATAGGAGAGAAAACACGTTCACCGTGCCGGTACAGGATTTTCGAGAAGAGATCAAGGCGTCTCTCGCGAGAAAAATAACCCCTATTTACCGCGAGCTGTACGAAACGCACCGTATTGGACTGGGAACGGTGAGGGAAATGAGAGAGTATGTCACATTTGCCCCTGAAGATGTTGAGAATTACATGATGAATCTTTTCTCTAAGGGAAGAGCAAGCTCCGGTAATGGAGGAAACAATTCATGTTTTGTAAAGTGTAAAAAATGCAAATGA 1881 0.4997 MRLVCFEPKTQSFSFSRHTRPASSSTASPSSTSANESFDFEEAEALILKWNPETSAYGRVTSLFYNDKAEAMHYIHCVNMLQKTMHSLISQNSSSPKLILAHNLMQIAMKRLQKEFYQILSMNRAHLNPESVSTRSSTTSRTSFCSDSYDDATAEEDVRQSGDCISEVERVSSEAMADLKSIADCMISNGYAKECISVYTTMRKSIVDEGIYRLNVEQLSASKVNKMHWDVLEFKIKSWLEAVKIAVRTLFAGERILCDHVFGASQSIREVCFADISRSGASLLFGFPELVVKTKKSPPEKIFRMIDMYAAIATLWLEIESIFSLDSTTAVKSQAYGLLLRLSESVRTSLLEFVTAIQKGSPKSTANFAGVHSLTVQVMNHLTTLADYSNVLSEIFLDVPPPPRSPLPESYLYSPESDDTTTTETEFSVQMARLILVLLCKIDGKSRHYKEVSLSYLFLANNLRHVVAKVRASNLHYVLGDDWVMNHDAKVKRLTANYERVAWGKVFSSLPENPTAEMSPAEARVMFGNFNFEFEKAYRRENTFTVPVQDFREEIKASLARKITPIYRELYETHRIGLGTVREMREYVTFAPEDVENYMMNLFSKGRASSGNGGNNSCFVKCKKCK* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1024 626 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 610 - -
Gso13g1024 626 Gene3D Exocyst complex component Exo70 60 610 - -
Gso13g1024 626 SUPERFAMILY Cullin repeat-like 41 603 IPR016159 -
Gso13g1024 626 MobiDBLite consensus disorder prediction 16 35 - -
Gso13g1024 626 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 610 IPR004140 GO:0000145|GO:0006887
Gso13g1024 626 Pfam Exo70 exocyst complex subunit 237 599 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1024 Gso-Chr13 24632601 24634664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1024 40 603 EXO70 exocyst subunit family AT3G09520 54.291 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1024 K07195 - gmx:106795635 1154.43