Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1020 ATGGACAAATCCCGCCACAGCAAGTCCAACGCAGCACCCTCCTCCACCCACCAACCTCAACCACCTCTTCCTCAAGGGAACAAAGAGGTTCATAGACAGCGACAACCTCTGAATCTATCTCCTGATCCTGGTTCATCCAGTGGTGGGGTTGCATACAAGGATTCATTCTCATCTAAATTCGGGTGGAGATCTTCCAAACAGCTGTTTGGAACTCCGATTAAGAAGTTATTAGCTGAAGAGATGTCACCGAAAGCTGAATCCAAAAGAAGATCACCTGGTGTTATTGCCAGATTGATGGGGCTTGATGGGCTGCCGTTCCAGCAGCCTACTAATAAGCAGCATAAGGCTTTGTCAGAAAACCAACAGAAGACAGCACAATTAGAGAGAACACGCGGCAAAGGAGTGCCATATGATGGTCAATCGTCTAGGAGAAGCTCAAAGGATCACCAAGAATTTAAGGATGTATTTGAGGTCTCAGAGATTCCAAAGGTAGAGAGCCATAGGTATCCATCACAGGGGTGTGCAGACTTGATGACCACTGATGCCGAAATCTCATTCATTGAACAGAAGTTCATGGATGCCAAACGACTTGCAACTCATCAAGACTTACAGTCTTCAAAGGATTTCTGTGACACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAATACTTTAAGCGTCCAGATTCTTTGTTTAAAAAGCATCTAAATGATCTTCAAGCTGCTCCTGTCCAATCACATTATGGTTATGTAAAACCTATGGATATTGAGAAGTATGAACATGACTTCAATTTGAGGTCAGATTGGGAGAAAACACGGTCAAACTACAATAGATCATCTCATGAGAAGCATCATGATGGTTATCCGTGTCATTTTGACAAAAGACATGTGATGCATAGTTCACCAAAATCATCAAAGCTTCAATTTAAGGCTAAATATGAACAAAAGGCAGTCACCTCACAGATTGTCCTTCTGAAACCTAATCTTGGAAAAGTGCAGAATGGTACCAGAATTGTGTCATCACCTTGTTCTTCACATAATTTTCTGGCAGGGTGTGAAAATGACACTGAACTGTGCCAAGCGACAAATTTGCCTGAAAGTGCCAGGTCTTGGAGGCAAGATTCTTTTGAATCTAGAGAAATTGCAAAGGAAGTCACTAGGCAAATGAAAATTAGTCTTAACAATGGAAGCATGAAGCTTTCCACCTCTAGAATTAGAGGTTATGCTGGGGATGATAGTTCGTGTAGTGTTTCTGGGAATGAATCTCCTGAGGAGTCTGAGGAAACAACTGCAACTTTGGGGAATTCGATTGACTTAAACAACCGCAGCAGGCGATCATCCCGTTCTAGTGAATCTTCTGTCAGTAGAGAGGCAAAGAAGAGACTATCAGAGAGGTGGAAAATGACACACAAGTCTCAAGAGCTGCAAGGCATCAGCAGGAGCAGTACGCTGGCTGAAATGCTTGCCATCCCTGACATGAAATTGAAGGCTTCTAATTCGGACAGCATGGCTAGTGGGGAAGGTTTCCATGATAAATGTACTCCCAATAGTCAACCTGCTAAGTGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAGGACGGATGCATTGGTAGTTTGTCGCGGTCAAAATCCCTTCCGTCTTCATCTACTGCCTTTGGAAGTCCTAGAAGATTCTTGCGCACTGAAGCACTTCTTGATGAGCGATTTATGGTGCCAAAGGATGCTCACAGACGTGAGAGGAGAAGATCTGGTCACAAGAAGTCTAGGTCTTTGCATTCATCAATTCAGAATAAGATGAAAATCAGTCTCAAAGATTCACCCAAGCTTGAGGTTCTAGCTAGTGAATCTTCATCTGAGATTGTAAGACATGCAGTTGCTGATGTTGATAACGATGTGACAAATGGAAGTAAAGTTTGGTCTGAACCTTCTACTAAGGTGCTTCCTGAATCATCTTCTCACCTTTTGATAAAAGACAACAGTAGTGCAGACCTAGACAATTCAAAACAGCAGGATCTATCAGCTTGTTCATCTTGTGGAAGTTCAGTCCTCCCTGAACCTCTCGTTCCTGTTCCTGGACTTGAAGCTTCTTGCTGTAAAGATGCTGATCAGCCCAGTCCTGTCTCAGTCCTGGAGCCTTCGTTTACAGATGATGCGTCATCTTGTTCTGATAATTTTGAAAGTCTGAATAATGACCTACAAGGGCTGCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGATGAATATGTGGAGGGGCCCATGATAGTAAGTGATGAAGATGGTGGGGAAGGATCTACTGGAATGTTAGAGGACAAAGGATTGCGTAGGACTGAAGATAGCTGGGAGTGTTCCTACATTATTGATGTCTTGTCTGAATCTGGCATTGATGGAGCTCAGCCAGATACAATTTCGGAACTTTGGCATTCCCTAGAATGCCCTGTGAGTCTATCTGTTTTTGATGAGCTTGAAAAGAGGTATGGTGATTGGACTACTTGCTCAAGGTCTCAAAGGAGATTGCTTTTTGACCGTATTAATTTGGGAATTGTCAAGATCAATGAGCAATGCACTCATGCACTACCATGGGTGGGTCCAGTGACCAAAAATGTTATTGGTTCTAATTTGATCGAGAATGGGTTCCGAGATGGCCTTCTGAGGATGTTAGTGAGCGACGGAAAAGTGAAGGATGATGCTCTGGGGAAGGTGCTAGTTATGGAATCAGAGTGGTTGGACTTGAGAGATGACATTGATGTCATAGGCAGGGAAGTTGAGAGATTGTTGTTAGATGATTTAGTGGCAGAGATAATCGGTGCTTAG 2829 0.4341 MDKSRHSKSNAAPSSTHQPQPPLPQGNKEVHRQRQPLNLSPDPGSSSGGVAYKDSFSSKFGWRSSKQLFGTPIKKLLAEEMSPKAESKRRSPGVIARLMGLDGLPFQQPTNKQHKALSENQQKTAQLERTRGKGVPYDGQSSRRSSKDHQEFKDVFEVSEIPKVESHRYPSQGCADLMTTDAEISFIEQKFMDAKRLATHQDLQSSKDFCDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQAAPVQSHYGYVKPMDIEKYEHDFNLRSDWEKTRSNYNRSSHEKHHDGYPCHFDKRHVMHSSPKSSKLQFKAKYEQKAVTSQIVLLKPNLGKVQNGTRIVSSPCSSHNFLAGCENDTELCQATNLPESARSWRQDSFESREIAKEVTRQMKISLNNGSMKLSTSRIRGYAGDDSSCSVSGNESPEESEETTATLGNSIDLNNRSRRSSRSSESSVSREAKKRLSERWKMTHKSQELQGISRSSTLAEMLAIPDMKLKASNSDSMASGEGFHDKCTPNSQPAKWVEPLGISSRDGWKDGCIGSLSRSKSLPSSSTAFGSPRRFLRTEALLDERFMVPKDAHRRERRRSGHKKSRSLHSSIQNKMKISLKDSPKLEVLASESSSEIVRHAVADVDNDVTNGSKVWSEPSTKVLPESSSHLLIKDNSSADLDNSKQQDLSACSSCGSSVLPEPLVPVPGLEASCCKDADQPSPVSVLEPSFTDDASSCSDNFESLNNDLQGLRMQLQLLKLESDEYVEGPMIVSDEDGGEGSTGMLEDKGLRRTEDSWECSYIIDVLSESGIDGAQPDTISELWHSLECPVSLSVFDELEKRYGDWTTCSRSQRRLLFDRINLGIVKINEQCTHALPWVGPVTKNVIGSNLIENGFRDGLLRMLVSDGKVKDDALGKVLVMESEWLDLRDDIDVIGREVERLLLDDLVAEIIGA* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1020 942 MobiDBLite consensus disorder prediction 106 128 - -
Gso13g1020 942 PANTHER AFADIN 26 940 - -
Gso13g1020 942 MobiDBLite consensus disorder prediction 411 450 - -
Gso13g1020 942 MobiDBLite consensus disorder prediction 501 524 - -
Gso13g1020 942 MobiDBLite consensus disorder prediction 411 479 - -
Gso13g1020 942 MobiDBLite consensus disorder prediction 1 55 - -
Gso13g1020 942 MobiDBLite consensus disorder prediction 451 473 - -
Gso13g1020 942 MobiDBLite consensus disorder prediction 583 598 - -
Gso13g1020 942 MobiDBLite consensus disorder prediction 31 55 - -
Gso13g1020 942 MobiDBLite consensus disorder prediction 104 151 - -
Gso13g1020 942 Pfam Protein of unknown function (DUF3741) 188 232 IPR022212 -
Gso13g1020 942 Pfam DUF761-associated sequence motif 86 106 IPR032795 -
Gso13g1020 942 PANTHER AFADIN 26 940 - -
Gso13g1020 942 MobiDBLite consensus disorder prediction 575 604 - -
Gso13g1020 942 Pfam Domain of unknown function (DUF4378) 788 938 IPR025486 -
Gso13g1020 942 Coils Coil 730 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1020 Gso-Chr13 24581486 24586721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1020 70 942 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 37.844 8.77e-139 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1020 - - gmx:100794819 1835.85