Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1018 ATGGAAGATTCTTCCTCAGCCGCTTATATCCACCTGGTGCACCGTCTGATAGAGGAGTGTATCCTATTCCACATGAGTCAAGAGGAATGCATGGAAGCTCTTTCCAAACATGCAAATATCAAACCGGTTATTACCAGCACTGTATGGAAGGGGCTAGAGAAGGAAAACAAGGAGTTCTTCAAGGCCTATTCGAAGAGTAAAGCAGAGAGAGCTTCGAAGACAGAAGTTAGGCAAAAGATACACAAGATGGTTTCAGAATCACATTCTTCCAGTTCCAACGAACGAGTTTAG 291 0.4364 MEDSSSAAYIHLVHRLIEECILFHMSQEECMEALSKHANIKPVITSTVWKGLEKENKEFFKAYSKSKAERASKTEVRQKIHKMVSESHSSSSNERV* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1018 96 Pfam Plant protein 1589 of unknown function (A_thal_3526) 13 64 IPR006476 -
Gso13g1018 96 PANTHER OS02G0137100 PROTEIN 1 93 IPR006476 -
Gso13g1018 96 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 10 64 IPR006476 -
Gso13g1018 96 MobiDBLite consensus disorder prediction 74 96 - -
Gso13g1018 96 PANTHER ARGININOSUCCINATE LYASE 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1018 Gso-Chr13 24554243 24555741 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1018 - - gmx:100811683 170.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g1018 13 24554243 24555741 Gso19g1451 19 43393819 43395111 PCT
Gso13g1018 13 24554243 24555741 Gso3g1463 3 40613601 40615091 PCT