Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1012 ATGTCTTTCCACAATCAAGCATTTTGGATGGGGAAGAGTCCTGGGGGGTTGAATGACGGTGACATGACAAATGACAATTCTTCTAGAATAGAGTCCAAGCGTGCTCATCAGTGGTTCATGGATGACCCTGAAGTGGATATGTTTCCCAATAAGAAACAAGCCGTAGAGGCTCCAAACAATTTGTTATCTGGAATGCTCAACTCCAATATTTCTTCATGGGGAAATTCCTCAGGATTTCACTCTTTAAATGGTCATTTTACTGAACAGTTATTTGCCCCAGATGCAGTAACTATGGGTTTTGAAGACACAAACACCCCCTCTGTTAGCATAGATGATAAGTTGAGTGTGGAAAGAAAGGATAACATGGATCCCTTTGGGAGTGAGTCCTCATTTGGTTTATCCATCTCAACTGCATTAGAAGATCCTCATTTAGTTTTTAATTATGATGGAACTAGAAAAGTCAAAGTTAATGAGGTGAGGGAATCTGAGAATGCCATGCCTGTTGCTACAAATAATCCCTATGAAAGAGGTGTTAGTGACAGTGTCTCAAATCCTTGTCTATACAAGGAGGATGATAATTCCATATCAACAAGTCTCGCCTACAATGAAGAGGTTGCGAATATAATAACAATGGATGGCACATATGACAGGACAGATAACAATTTTACATCAATGATTCAATCCTATAACAAGGGAAATGACAGCTTATCTATACATCCAACGTTCAATGAAATGGATTTGGGTTTCAGTAAGGTAGATAGTAATGTAACATCTATTGCTCAAGGTTACAACAAGGCCTATAACAATTCCGTGTTAACTAACCACTTATACAGTAAGGTTGACAATGACACTTTATCATTGCATCACACCTACCACAAGCAGGGAAATGATGTGCCATTTGTTTCACATTCCTATAATAATGGAGAGAGCACTATCATATCCTTTGGTGGCTGTGATGATGATGCAACTCCCACTCACTTATTCATTTCTGACTATGAGAGCATCTATCATTTACTTCCAAGTACAGCTCAGACATCTGAACCTGAGACTGAAAATGTTCCCAAGACAAAAGGGGAGATAAAAATGTCTAGAAAAGCTACTTCAAACAACTTCCCTTCAAACGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGTCTCTCAGTAAAGTACAAGGCGTGGTCACGGGAGGAACTTCGAGGTGTTATAAAAGGTGCTGGCTATTTGTGCAGTTGTCACTCATGTAATTTTTCCAAGGTTATTAATGCATTTGAATTTGAGCGACATGCTGGTTGCAAGACAAAACACCCCAATAATCACATTTACTTTGATAATGGGAAAACTATATATGGGGTTGTACAAGAGCTCAGGAGCACTCCACAGAGCATGTTGTTTGAAGTTATTCAGACTATAACTGGTTCACCTATCGATCAGAAATCCTTCTGCATTTGGAAAGAATCTTTTTTGCCTACAGCAGGGAACTCCAGCGCATATGGGCAAAACAAGAAGTAA 1512 0.3942 MSFHNQAFWMGKSPGGLNDGDMTNDNSSRIESKRAHQWFMDDPEVDMFPNKKQAVEAPNNLLSGMLNSNISSWGNSSGFHSLNGHFTEQLFAPDAVTMGFEDTNTPSVSIDDKLSVERKDNMDPFGSESSFGLSISTALEDPHLVFNYDGTRKVKVNEVRESENAMPVATNNPYERGVSDSVSNPCLYKEDDNSISTSLAYNEEVANIITMDGTYDRTDNNFTSMIQSYNKGNDSLSIHPTFNEMDLGFSKVDSNVTSIAQGYNKAYNNSVLTNHLYSKVDNDTLSLHHTYHKQGNDVPFVSHSYNNGESTIISFGGCDDDATPTHLFISDYESIYHLLPSTAQTSEPETENVPKTKGEIKMSRKATSNNFPSNVRSLLSTGMLDGLSVKYKAWSREELRGVIKGAGYLCSCHSCNFSKVINAFEFERHAGCKTKHPNNHIYFDNGKTIYGVVQELRSTPQSMLFEVIQTITGSPIDQKSFCIWKESFLPTAGNSSAYGQNKK* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1012 503 Pfam Tify domain binding domain 401 456 IPR032308 -
Gso13g1012 503 MobiDBLite consensus disorder prediction 343 367 - -
Gso13g1012 503 PANTHER PROTEIN, PUTATIVE-RELATED 5 502 - -
Gso13g1012 503 PANTHER AUTOIMMUNE REGULATOR 5 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1012 Gso-Chr13 24497306 24500991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1012 352 488 PHD Transcription Factor Family AT3G53680 53.623 3.80e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1012 - - gmx:100792190 1021.92