Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1011 ATGGAGACACAAAATTGGTTCGAAAGAGTGAAGCCTTTAGCAGCTGTGGTATCAATGCAGTTTGGATATGCAGCTATGGATGTTCTATCCAAGGCTGCAATGAACAAAGGGATGAGCAACTATGTGTTTGTCGTTTATCGTCATGCTGTTGCATTCTTTGTTATGGCCCCTTTGGCATGGTTTTTTGACAAGAAAGTAAGGCCAAAGATGACATTATCAATTTTCATGAAGATAGCGGTGCTCAGCTTGCTAGAGCCAGTTATTGACCAGAATTTGTATTTTTTGGGGATGAAGTACACAACAGCAACCTTTGCCGTTGCCACGACCAATATGCTTCCTGCCATTACCTTTATCTTCGCATGCATTCTTAGGCTTGAGAAGATAAAAATAAAAAGTATAAGGAGCCAAGCAAAGGTGGTAGGAACTCTAGCAACTGTTTCGGGTGCCATGGTTATGACACTGCTGAAAGGTCCCGTACTTTTAGGGTCACACAGAAGCAATGATCACGGCCAGCACAATGGGACAAGTATGCAGCATACAATAACGGGATTCATAATGATCACAATTGGATGCTTTAGTTGGGCTTGTTTCGTGATCCTACAAGCTATTACGCTTAAAACCTACCCTGCTGAACTCTCTCTTTCTGCGTGGATATGCTTAATGGGCACAATTGAAGGTGCCGCAGTGGCTTTGATTATGGAAAGGGGCAACCCTTCAGTTTGGTCTCTAAAATTGGACATGAAACTGCTATGTGCAGTCTACACTGGCATAGTGTGCTCGGGAATGGGCTATTACTTGCAAGGAGTAGTGATCAAAACTAGAGGCCCAGTCTTCGTAACAGCTTTTAGTCCCCTCTGCATGGTAATCGTGGCTGTCATGAGCTACTTTATTCTGGCCGAACAAGTGTTTCTTGGAAGAATGATCGGTGCCGTTATTATTTGTTTGGGCCTATACGTTGTGGTGTGGGGGAAAAGCAAAGATTATAGCCCACCAAACCCAAATACTCAAGAGCCCACATTACCGGCAAAACAAATAGTAAATGAGGACAATGCTAAGAAGGAGAATTACAATTGCACTCACGAAGTCATCAACGTCAACAATTTTGGAAATGGAATCACTAGAAATGAAGAACTAGTGTGA 1140 0.4289 METQNWFERVKPLAAVVSMQFGYAAMDVLSKAAMNKGMSNYVFVVYRHAVAFFVMAPLAWFFDKKVRPKMTLSIFMKIAVLSLLEPVIDQNLYFLGMKYTTATFAVATTNMLPAITFIFACILRLEKIKIKSIRSQAKVVGTLATVSGAMVMTLLKGPVLLGSHRSNDHGQHNGTSMQHTITGFIMITIGCFSWACFVILQAITLKTYPAELSLSAWICLMGTIEGAAVALIMERGNPSVWSLKLDMKLLCAVYTGIVCSGMGYYLQGVVIKTRGPVFVTAFSPLCMVIVAVMSYFILAEQVFLGRMIGAVIICLGLYVVVWGKSKDYSPPNPNTQEPTLPAKQIVNEDNAKKENYNCTHEVINVNNFGNGITRNEELV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1011 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 152 - -
Gso13g1011 379 Pfam EamA-like transporter family 18 133 IPR000620 GO:0016020|GO:0016021
Gso13g1011 379 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Gso13g1011 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 325 - -
Gso13g1011 379 PANTHER WAT1-RELATED PROTEIN 9 339 IPR030184 GO:0016021|GO:0022857
Gso13g1011 379 PANTHER WAT1-RELATED PROTEIN 9 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1011 Gso-Chr13 24493474 24497274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1011 1 370 Nodulin-like Gene Family AT2G37460 61.290 9.27e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1011 - - gmx:100811147 756.903