Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1001 ATGGCATTAAACATAACCTCCATCAAAACATCCTCCAACGGCTTATGGCAAGGAGACAACCCCTTAGACTTCGCCTTCCCTCTCCTCATTCTCCAAATCACCTTAATCATCCTCCTCTCCCGCTCTCTCGCCTTCCTCCTCAAACCTATCCGACAACCTAAAGTCATCGCCCAAATTATAGCTGGGATTGTCTTGGGTCCTTCCGTTCTGGGAAGGAACAAGACATTCAAGCACCGCCTGTTCCCGCCATGGAGCACCCCGTTGCTGGAATCGCTGGCTAGCATAGGTCTCCTCTTCTTCTTGTTCCTGGTAGGTCTCGAGCTCGACTTGGTCACGATTCGCCGGAGTGGAAAGAGAGCTCTGAGCATCGCCGTCGCCGGAATGTCCCTCCCCTTCGTCTCCGGCATTGGCCTCGCCCTAATCCTCCGCAAGACCGTCGACGGCACCGACAGAGTCGGCTTCGCTCAGTTCCTCGTCTTCATGGGAGTGGCGATTTCCATCACGGCCTTCCCCGTGCTCGCCCGCATCCTAACCGAGCTCAAGCTCCTCACCACGCGAGTGGGCTGCACCGCCATGGCCGCCGCCGCGTTCAACGACGTCGCGGCGTGGATCCTCCTCGCCCTCGCCATCGCGCTCGCCGGCGACGGCGTCAACAGCCACGTCCACAAGAGCCCCCTCGTCTCGCTATGGGTGCTCCTCTCCGGCGTGGCCTTCGTCGCCTTCATGATGATATTAGTCAAACCGGCGATGAGATTCGTCGCCGGAAAATGCTCACCGGTGACCGGCGCGGTGGATGAAACCTACGTGTGCTTGACTCTGCTGCTCGTGATGGTGTTCGGGTTCGTGACGGACATGATTGGGATCCACTCGGTTTTCGGCGCGTTCGTGTTCGGAATAACGGTTCCGAAGGGCGCGTTTGCGGAGAGGCTGATAGAGAGGGTTGAGGATTTCGTTGTAGGGTTGTTGTTGCCGTTGTATTTTGCTTCGAGTGGGTTGAAGACGAACGTGGCTACGATAAGTGGCGCGAAGGGGTGGGGAATTTTGGCGCTGGTGATTGCGACGGCGTGCGCCGGGAAGATTGGGGGGACGTTTCTGACGGCGGTGGCGTGCAAGATTCCGATTAGGGAGGCGATGACGCTGGCGGTGCTCATGAACACTAAGGGGTTGGTGGAGCTCATCGTCCTCAACATTGGGAAGGAAAAAAAGGTGTTAAACGATGAAATGTTTGCCATTTTGGTTCTTATGGCTCTATTCACCACCTTCATTACAACCCCAATAGTGTTGTCCATCTATAAAAACACTAATGACATATCCTTTCATCAAACCCTGAGAAAACTAGGTGACCTTGACACTAATGATAAAGCCACTAACGAGTTTCGCGTCTTGGCGTGTGTGCATGGCCCCAACAACGCTCCTTCCATCATTAACTTGATTGAGTCAATTCGTAGCATCCAAAAATCCTCCCTCAAACTCTTCATCATGCACCTTGTTGAGCTCACAGAACGCTCTTCATCAATCATCTTGGCTCAGAACACTGATAATAAGAGTGGCTCTAGCCATGTTGAGTGGCTAGAGCAACTTTATAGGGCCTTCCAAGCCCATAGTCAATTGGGTCAAGTTTCAGTTCAGTCCAAGACCACTATCTCTTCGTTGTCCACTATGCATGATGACATTTGCCACGTGGCAGATGAGAAAATGGTGACCATGATCATCTTGCCTTTCCACAAGCGGTGGAAGAAGGTGGAAATGGAAAATGAGGAGGAGAACAGTGAGGTTTCCCAACACCAAATGGAGGAAAATATTGGCCATGGGTGGAGAGGTGTGAACCAAAGTGTACTTAGGAATGCACCTTGCACTGTGGCTGTGCTTGTTGATCGAGGATATGGACATGGGCCTCAGAATTTGGGCCTATATACCACTGTGACCCAACATGTTTGTGTTTTGTTCTTTGGTGGGCCCGACGATCGTGAGGCCTTGGAGTTGGGGGATAGAATATCTAACCATCCAGCGGTTAAAGTGACTGTTGTGAGGTTCATTCACAAAGATGTGTTGGAAGGTAACGACATGTCACACTCTTCACCAAGCAAAACTAATGGGAAAAGTTACAATTTAGCCATATCTAAAGTGTACCCTCCAAAGGAAAAGGAGCTAGATGATGCAACAATGGCAAGGTTCCAAAGAAAGTGGAATGGAATGGTAGAGTGTTTTGAGAAGGTAGCTAGTAATATTATGGAAGAGGTGTTAGCATTAGGGCGAAGTAAGGATTATGATCTCATAATTGTTGGGAAAGGTCAATTTTCGTTGAGTTTGGTGGCAGATTTGGTAGATAGGCAGCACGAGGAATTAGGTCCTATTGGAGACATTTTAGCATCATCAACGCATGATGTGGTTTCTTCAGTGTTAGTAATTCAACAACATAATGCGGTACTGAATGGGGAGACCCCTTTATCTATGAGAAATGACAATGTAATATAA 2475 0.5014 MALNITSIKTSSNGLWQGDNPLDFAFPLLILQITLIILLSRSLAFLLKPIRQPKVIAQIIAGIVLGPSVLGRNKTFKHRLFPPWSTPLLESLASIGLLFFLFLVGLELDLVTIRRSGKRALSIAVAGMSLPFVSGIGLALILRKTVDGTDRVGFAQFLVFMGVAISITAFPVLARILTELKLLTTRVGCTAMAAAAFNDVAAWILLALAIALAGDGVNSHVHKSPLVSLWVLLSGVAFVAFMMILVKPAMRFVAGKCSPVTGAVDETYVCLTLLLVMVFGFVTDMIGIHSVFGAFVFGITVPKGAFAERLIERVEDFVVGLLLPLYFASSGLKTNVATISGAKGWGILALVIATACAGKIGGTFLTAVACKIPIREAMTLAVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPIVLSIYKNTNDISFHQTLRKLGDLDTNDKATNEFRVLACVHGPNNAPSIINLIESIRSIQKSSLKLFIMHLVELTERSSSIILAQNTDNKSGSSHVEWLEQLYRAFQAHSQLGQVSVQSKTTISSLSTMHDDICHVADEKMVTMIILPFHKRWKKVEMENEEENSEVSQHQMEENIGHGWRGVNQSVLRNAPCTVAVLVDRGYGHGPQNLGLYTTVTQHVCVLFFGGPDDREALELGDRISNHPAVKVTVVRFIHKDVLEGNDMSHSSPSKTNGKSYNLAISKVYPPKEKELDDATMARFQRKWNGMVECFEKVASNIMEEVLALGRSKDYDLIIVGKGQFSLSLVADLVDRQHEELGPIGDILASSTHDVVSSVLVIQQHNAVLNGETPLSMRNDNVI* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1001 824 Gene3D - 460 800 - -
Gso13g1001 824 Pfam Sodium/hydrogen exchanger family 34 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso13g1001 824 PANTHER CATION/H + ANTIPORTER 3 811 - -
Gso13g1001 824 Gene3D - 28 437 IPR038770 -
Gso13g1001 824 PANTHER BNAC06G14930D PROTEIN 3 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1001 Gso-Chr13 24396370 24400033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1001 76 807 Antiporter Super Family AT3G53720 60.241 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1001 - - gmx:100805993 1552.73