Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0988 ATGCAGATGCTCATAGACAAAGAGATGTCCAAAAAAAAAGACTCCAAGCACACCCTACCAAATGTAGTAGCAAAACTAATGGGGCTTGAGGCCCTTCCAAGGGGAGAGCCTCATTTATCTATGGAAAGAAGCCACAGAAGAGACTATTCTCAACAAATGTATGGTCCTGTAGGCTTACCATTCAAGCATTGGCAACAGGAAGATAGGTTTATGGATAGGGAAATGCTTCATGAAGTTCATCCAAGCACAGAACAGGTTGCTTACAAAGATATGTATGAAATATGGCAGCAATCTCAGAGAGCAAGCCATGACAGAGGAAAGTGGAGTGAAGATGTTGATGAGAAAAGAATGGCTCTGATTCGACAGAAATTCATGGAAGCAAAACGTCTGTCAACCGATGAGAGACTGCACCAATCTGAACAATTTAAAGATGCCTTGGAAGTTTTAAGCTCCAATAGTGATCTCTTGATCAGGTTATTGGATTCTCAAAATGTTTCTGATTTATACTCAACTTCACCTAATGAGACAAAGCGCATTACTCTTATTAAACCTTTGAAGATGGTTGACAACGACAAATCTGCCAGAAAGGAGAAAACGAATAATAGACCGATTAAGAAACCATCTAGTGTTGATCAAGCAAATCCTGGAAACTCTCCAGATAGTCAGAAAGTTGATGAATCTCCGGTCCGAACCACTCGAATAGTGTTACTAAAGCCAAGCCCAGGGAGGACACCTGAGCAAAAGGCTGTTGTTTCTCCAACAACTTCGCTGAATCTGAAAAGCAGAAATTTCCATCATGGACCTGAATATGATGATGTACTAGAATCCATTAGAGTGGCAAATGAGATCACACAGCAAATGCATAAAGGCCCGAGGAGCTATCAAAAGGATAAAACTCTGTATTCCTCAGTGTTTTCCAATGGCTATTCTGATGATGAGAGTTCATTCAACAAATCATATCATGAGTATGCATCTGCGAATTTCAGTGATTTTGAAGCTACGTCAATGTCACCATTGCCAAGGCTTTCGTGGGATTACAATTACATCAATGGCTATGGCAGCCCTTATTCTACAATGTCCTTGGGCCGTGTGCCATGCTCTCCCGAGTCATCGGTGTGCAGAGAGGCAAAGAAAAGACTTTCTGAAAGATGGACTATGATGACATCAGATAATAAGGGTCATCAAGAACAAAGGCGAGCAAGGAAAAGCTCTACCTTGGGTGAGATGCTTTCTCTTACCCACAAAAAGAAATCTGTAACATCTGAGGTTGAGAGTATCAATGAGGACCAAGAACCTGGCAAATCTGTTTCTTGCAGTCATTCTTTCAATGCAGAAATAAGCATTGAGGGTTCTCCTAAAAATCTCCCCAGGTCAAATTCTGTGCCTGCATCTTCTACTGTATATGAAAATGGCCTCACAGTTAAAGTAAATGATCATAAGAATACTGGCAAAGCACAAGGCTCCAAGGAGCAGAAAAAGCCTAAGAGTATGAGATCATCTTTTAAAGGGAAAGTTGCTACTTTCTTGTTCTCAAGGAGTAAGAAATCAACCAAGGAAAAACCAAGTTCATCTCAATCTAAAGATGCATCCCAATCTACTTCCACTGTCACTGCAACATTAGTTCTTCCAGCAAATTCACCTGGAGTCCTTAGGGGTGATGTGTCTCAAAGCATCAATGTGGATGGTTTTGAAGAGTGTTCTCTTGCAGCGCTATGTGAATCATCAGGGAAAAATTCAACAGATTCAGTCTCTAACGGACATGAAGAAGACATGATTACACTAGAGCCTGGATTGACTATGCCAAGGCCCATGGTGCCAGAGATTCATTCAAGCGAAAACCCAGATCAGCCAAGTCCAATCTCAGTGTTACAACCTCCATTTGAAGATTATAATAATAATAATGCATCACATGAGTCCTTGAACTGTATGAAGAGTGGTGACCAGGGGTCACAGGTGCCACTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTAGGACCCTATCATGGGATGGTTCTAGTGCAGAAGTGGCAAGTTCCTATGCATTAAAACCCTTAATGGTTTCTTCCTTGGACTCCAAGGTAGAGGATCAAGAGTGGCTTCTCTTGGTCCACAAACTACTATCAGCAGCTGGACTTGATGATCAACACCAACATGACTCATCTTACACTAGATGGCATTCCCTTGAGAGCCCATTGGACCCATCACTGAGGGACGCATTATACGCCAATCTAAATGAGAAGGAGCCTCAGCCAATTATGCATGAGCGCAGAAGAAGGAAGATGAGATCAAACCACAAACTTGTGTTTGACTATGTCAATGCTGCACTATTGGAACTTGTTGGTTATGGGTCAGAAAAGTGCTTAAAGAGAAGTAAGAGCCACTGCAGGGTCCAAGTCCAAGAGGGTGCATCAGCAGCAGCATCTCCCTTATTGGTGGACCACATTGTGGCCCAAATGAAGGAATTAATAGCAAGTGGGGTGAGGTGTGAGTGGGAAAATGGTGGGGCCAGCACCAGCCTGGTGGTAGAAAATGTTGTCAGAAAAGAGGTTGTGCAAATAGGGTGGGTTGAGCTTATGGAATTGGAGATTGATATTTTGGGGAAGGAGATTGAAGGGGACTTGATTCAAGAGCTTGTGGAGAATGCAGTGGTTGATTTGACAGGCAGGGCCTCTGAGTCCCTCTCTTGA 2703 0.4255 MQMLIDKEMSKKKDSKHTLPNVVAKLMGLEALPRGEPHLSMERSHRRDYSQQMYGPVGLPFKHWQQEDRFMDREMLHEVHPSTEQVAYKDMYEIWQQSQRASHDRGKWSEDVDEKRMALIRQKFMEAKRLSTDERLHQSEQFKDALEVLSSNSDLLIRLLDSQNVSDLYSTSPNETKRITLIKPLKMVDNDKSARKEKTNNRPIKKPSSVDQANPGNSPDSQKVDESPVRTTRIVLLKPSPGRTPEQKAVVSPTTSLNLKSRNFHHGPEYDDVLESIRVANEITQQMHKGPRSYQKDKTLYSSVFSNGYSDDESSFNKSYHEYASANFSDFEATSMSPLPRLSWDYNYINGYGSPYSTMSLGRVPCSPESSVCREAKKRLSERWTMMTSDNKGHQEQRRARKSSTLGEMLSLTHKKKSVTSEVESINEDQEPGKSVSCSHSFNAEISIEGSPKNLPRSNSVPASSTVYENGLTVKVNDHKNTGKAQGSKEQKKPKSMRSSFKGKVATFLFSRSKKSTKEKPSSSQSKDASQSTSTVTATLVLPANSPGVLRGDVSQSINVDGFEECSLAALCESSGKNSTDSVSNGHEEDMITLEPGLTMPRPMVPEIHSSENPDQPSPISVLQPPFEDYNNNNASHESLNCMKSGDQGSQVPLKSNLIDKSPPIESIARTLSWDGSSAEVASSYALKPLMVSSLDSKVEDQEWLLLVHKLLSAAGLDDQHQHDSSYTRWHSLESPLDPSLRDALYANLNEKEPQPIMHERRRRKMRSNHKLVFDYVNAALLELVGYGSEKCLKRSKSHCRVQVQEGASAAASPLLVDHIVAQMKELIASGVRCEWENGGASTSLVVENVVRKEVVQIGWVELMELEIDILGKEIEGDLIQELVENAVVDLTGRASESLS* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0988 900 MobiDBLite consensus disorder prediction 190 229 - -
Gso13g0988 900 MobiDBLite consensus disorder prediction 512 534 - -
Gso13g0988 900 MobiDBLite consensus disorder prediction 190 204 - -
Gso13g0988 900 MobiDBLite consensus disorder prediction 415 429 - -
Gso13g0988 900 Pfam Protein of unknown function (DUF3741) 121 164 IPR022212 -
Gso13g0988 900 MobiDBLite consensus disorder prediction 205 225 - -
Gso13g0988 900 MobiDBLite consensus disorder prediction 430 481 - -
Gso13g0988 900 Pfam DUF761-associated sequence motif 20 33 IPR032795 -
Gso13g0988 900 MobiDBLite consensus disorder prediction 388 500 - -
Gso13g0988 900 MobiDBLite consensus disorder prediction 482 497 - -
Gso13g0988 900 MobiDBLite consensus disorder prediction 610 629 - -
Gso13g0988 900 PANTHER DUF3741 FAMILY PROTEIN 1 895 - -
Gso13g0988 900 Pfam Domain of unknown function (DUF4378) 708 885 IPR025486 -
Gso13g0988 900 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0988 Gso-Chr13 24255595 24260354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0988 1 892 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 38.370 2.88e-143 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0988 - - gmx:100787955 1764.2