Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0977 ATGGATGAGAAAGCCAAGAAAAAGGGGAGAAAAGATGAAGTAATGAATATTAATGTTGCTGATGATAAAGAAGTGCAGTTCTTGGATGACAACCAAGAAAGCAAGATGAAGAAAAGAAAAAAAGATGATTCTTCATTAAATGGAATCCAAGAATTGGTTTTTTCAAAACCAAGCAAGAAAATGATGAAGGATAATAGGTTAAAAAGCAACAAAGGTAAAGATGATGACCAAGGCAAGCTGATGATGAAGAAGAAATTGAGTGCAGAAAACCAACATGTGGATCACAATGAATTTAAAAGTAATGAAGATAAAGATGATGGCCAATACAAGAAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAACTGAGTGAAGAAAGTAAAAGTAAAGAGTATAATGAGTTTGAAAGCAATGATGGTGGAGATGATGGCAAAGGTAAGAAGATGAAGAAGAAGAAACTGTGTGACAAAAGCAAAAGTAAGGAGAATTGTGAGTTCAATAGCAAGCAGATGATGAAGCAGAAGAAATCAGATGCAGAAAACCGACATGAGGGTTACAATGAATTTAAAAGCAATGAAGACAAAGATGACAATCAATACAAGAAGGAGGAAAAGAAGAGGAAGAAGAAAAAACTGAGTGAAGAAAGCAAAAGTAAGGATTATAATGAGTTTGAAAGCAATGAAGGGGGAGATGATGACCTAGGTAAGAAGAGGAAGAAGAAAAAACTGAGTGAAGAAAGCAAAGATAAGGAGTATAATGAGTTTGAAAACAATGAAGGAGAAGATGATGGTCAAGGTAAGAAGATGAAGAAGAAGAAACTGCGTGATAAAAGCAAAAATAAGGAGAATAGTGAGTTCAATAGCAATGAAGGTGATGTAAATGAAGTTGATGATCAAAGCAAGAAGATGGAGACAAAGAAGAACGCCAAGGCAGATACTGGTGAATCTCCTAATCCTGCACACAGTGGATCATCCAAACCCAAACGTGTAACTTTTTCGGATCAAGTGGATGTTTGTTGTGATGGCTTAATCCGTGGGAAAAGGTTTACACCAGAGGAAGATGAGAAAATTAAGTTGGCTGTTTTTGATTATATAGAGTCTCATGGTTTGGGAGATGAAGGTCTAGATATGGTTCTCCATTGCAAATCTCATCCTGAAATTAGAGATTGTTGGAAGGAAATTGGAGCAGCCTTACCTCAGAGGCCTTATGTTAGTGTGTATACTCGTGCTCATATTTTGTTTGAAAGGGGTGAGGATCGTAAGTGGACACCTGAAGAGTATGAATTTTTACGGAAGGTCAAGGAGCAACATGGATCTGATTGGAAATCAGTAGCTGAAGCATTGGGCAAACATCGATTTCATGTAAAGGATGCATGGCGTAGAATAAAATTAACCAACACAAACCAAGGACGATGGACCCAAGAGGAGTATCAAAATTTATTTGATTTAGTAAACCTGGATCTACGTGTGAGAGCTTCACAGGATTATAGAAAATCAAAACATGGTATGCTGCGAGATAATATTGGTTGGGAGGCAATTGGTGACAAATTGACCACTAGATCCAGTGTGCTCTGCTGCAAAAAGTGGTATGATAAATTAACGTCGCCTATGGTTGCCAATGGTGTATGGAGTGATACTGATGACTATCGCCTGGTAAATGCTTTATTTACTTTGGATGCTTGCTGCATGGAGGAGGTAGATTGGGACAATCTGCTTGAGCATAGGCCTGGTGATGTATGTAGAAAACGGTGGAACCAAATGGTCCAATATATTGGAGAGCATGGGGGGAAGTCATTTGCTGAGCAGGTTGAAATTCTTGCAAAAAGATTTTGCCCTGACTTATTGGAAGTAAGAGAGGCCTTTGATGAAAAACCTGTGATTTGTTGA 1908 0.381 MDEKAKKKGRKDEVMNINVADDKEVQFLDDNQESKMKKRKKDDSSLNGIQELVFSKPSKKMMKDNRLKSNKGKDDDQGKLMMKKKLSAENQHVDHNEFKSNEDKDDGQYKKEEEEEEKKKKKKKKKKKKLSEESKSKEYNEFESNDGGDDGKGKKMKKKKLCDKSKSKENCEFNSKQMMKQKKSDAENRHEGYNEFKSNEDKDDNQYKKEEKKRKKKKLSEESKSKDYNEFESNEGGDDDLGKKRKKKKLSEESKDKEYNEFENNEGEDDGQGKKMKKKKLRDKSKNKENSEFNSNEGDVNEVDDQSKKMETKKNAKADTGESPNPAHSGSSKPKRVTFSDQVDVCCDGLIRGKRFTPEEDEKIKLAVFDYIESHGLGDEGLDMVLHCKSHPEIRDCWKEIGAALPQRPYVSVYTRAHILFERGEDRKWTPEEYEFLRKVKEQHGSDWKSVAEALGKHRFHVKDAWRRIKLTNTNQGRWTQEEYQNLFDLVNLDLRVRASQDYRKSKHGMLRDNIGWEAIGDKLTTRSSVLCCKKWYDKLTSPMVANGVWSDTDDYRLVNALFTLDACCMEEVDWDNLLEHRPGDVCRKRWNQMVQYIGEHGGKSFAEQVEILAKRFCPDLLEVREAFDEKPVIC* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0977 635 Coils Coil 104 133 - -
Gso13g0977 635 SUPERFAMILY Homeodomain-like 427 487 IPR009057 -
Gso13g0977 635 Coils Coil 202 222 - -
Gso13g0977 635 MobiDBLite consensus disorder prediction 285 318 - -
Gso13g0977 635 MobiDBLite consensus disorder prediction 25 337 - -
Gso13g0977 635 MobiDBLite consensus disorder prediction 131 156 - -
Gso13g0977 635 ProSiteProfiles Myb-like domain profile. 428 470 IPR001005 -
Gso13g0977 635 Gene3D - 469 545 - -
Gso13g0977 635 SUPERFAMILY Homeodomain-like 520 598 IPR009057 -
Gso13g0977 635 Gene3D - 430 468 - -
Gso13g0977 635 ProSiteProfiles Myb-like domain profile. 542 595 IPR001005 -
Gso13g0977 635 Pfam Myb-like DNA-binding domain 429 487 - -
Gso13g0977 635 PANTHER GB|AAC33480.1 3 634 - -
Gso13g0977 635 ProSiteProfiles Myb-like domain profile. 471 540 IPR001005 -
Gso13g0977 635 SMART sant 475 542 IPR001005 -
Gso13g0977 635 SMART sant 352 423 IPR001005 -
Gso13g0977 635 SMART sant 425 472 IPR001005 -
Gso13g0977 635 SMART sant 546 597 IPR001005 -
Gso13g0977 635 MobiDBLite consensus disorder prediction 163 276 - -
Gso13g0977 635 MobiDBLite consensus disorder prediction 57 120 - -
Gso13g0977 635 MobiDBLite consensus disorder prediction 25 46 - -
Gso13g0977 635 MobiDBLite consensus disorder prediction 322 337 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0977 423 595 MYB Transcription Factor Family AT4G32730 25.698 3.98e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso13g0977 Myb_DNA-bind_6 1.8e-12 CL0123