Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0975 ATGTCAACTTCTCCTGTCTTCCTTTTCGCTCTCCTTTTCTCTTTCTCAGTGAACTCGGTTTCTATGAATGTGCTATTTGCTTCAGCTGAACGAGCTAAAATGTGGTTGGTTAAACTTTCTTCTGGACCATCTTTTGCTCCTGTGCAATCTCCATCTTATCAAGCTTGTAGCCAAATCTGTACAGATCCATTAACTGCAACTCCTTTTGGTTCACCCTGTGGTTGTGTATTTCCCATGAAAATCAGACTAGTACTGGATGTGGCTCCTTTGGCTGTTTTTCCAGTAATTGATGAGTTGGAGATTGAACTTGCATCTGCGACATATTTGAAGCAGAGCCAGGTGAGGATAATGGGTGTCACTTCTGACAGTCAAAGTCAGGGAAGAACCATAGTTGATATTAACTTGGTTCCACTTGGGGAAAAATTTGACAATACCACAGCAGTTCTGTTGTGTAAGAGGTTTTGGCACAACGAAGTTCCTCTTATTAGGAGCCTTTTTGGTGATTATGCCATCTTGTATATTACTTATCCAGGTAGTATACCATCAGCGCTGCCACCTGAAACCATAATTGGGAGAGGTCACATGCCCAGGGAGAGTGTTAATGTTCTCCCAATCACTGCAGATATGAACAGCGAGAATGAGAAGATGAATCTTAGAACTATAATCATCATTGCTCTATCTTCTGTTATACTCTTGTTGGTTTTGGTTGGAGCATTTTACATCATTTTGAAATGGAGGGAAATTAGGAGACCATCAGGTGCTGTTGGCCCTGCATTCAAATCATATCTAAACAAGAGATCTGGCATGGAATATATGTTGTCAAGCAGAATTATGAGCTCAAGATCTATGTCCCTTGTGTCCACTCTCGCTCATTCTATTCTCTCTGTTAAAACATTTTCCTTTTCTGAGCTTGAGAAAGCAACTGCTAAGTTCAGTTCTCAGAGAGTATTAGGAGAAGGAGGATTTGGGCGTGTTTATTGTGGGACATTGGATGATGGAAATGAAGTTGCAGTTAAACTGCTAACAAGGGATGGTCAGAATAGAGACCGTGAATTTGTCGCCGAAGTGGAGATACTAAGCCGCTTGCATCATCGTAATCTTGTGAAACTCATTGGTATATGCATAGAAGGGCCAAGGCGTTACTTGGTGTATGAGCTTGTTCACAATGGTAGTGTTGAGTCTCATTTGCATGGTGATGACAAGAAAAAGAGCCCTCTAAATTGGGAAGCACGGACAAAAATTGCTCTTGGAGCTGCAAGAGGATTGGCTTATCTACACGAGGATTCTATTCCTCGTGTAATTCACCGAGATTTTAAAGCTAGCAATGTTCTGTTAGAAGATGACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCGACTGAAGGAAAGAGTCATATTTCTACAAGGGTCATGGGTACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGTCATTTACTCGTTAAAAGTGATGTTTATAGTTTTGGTGTTGTGCTGCTTGAACTTCTAACCGGCAGGAAACCAGTGGACATGTCTCAACCTCAGGGACAGGAGAATCTTGTAATGTGGGCTCGACCAATGTTGAGAAGTAAAGAAGGTTTAGAACAGCTGGTGGATCCATCTTTGGCTGGAAGCTATGACTTTGATGACATGGCAAAGGTGGCTGCTATTGTTTCCATGTGTGTACACCCGGAGGTCAGTCAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATCTACAACGACACCAATGAGAGTAACAATGAGTCTTCTGCCTGGGCCTCGGATTTTGGAGGGGAACTTGTCTTTTCTGATAGCAGTTGGTTGGATGCTGAAGAGGTAACTCAAAGATTAGCTTATGGACAAGCATCTACCTTAATCACAATGGATTACAGTTCTGGTCATCTTGAAATGATGGAAAACAGACCGTTTTCAGCTTCAAGCTTCAATGGAGATGAGATTTCTTTGCCGATGGGGCACCAGGTTAGATCAGACCCCTTGAGAACTGCTCAGAGTAAGCTAACATTTTATAAGCTTACTCGAAGTCAGAGTGAACATGTGGTACATCCTTCCAAACGTGTTTGGAATGATGATGGTTACTGGGTTTAA 2130 0.4211 MSTSPVFLFALLFSFSVNSVSMNVLFASAERAKMWLVKLSSGPSFAPVQSPSYQACSQICTDPLTATPFGSPCGCVFPMKIRLVLDVAPLAVFPVIDELEIELASATYLKQSQVRIMGVTSDSQSQGRTIVDINLVPLGEKFDNTTAVLLCKRFWHNEVPLIRSLFGDYAILYITYPGSIPSALPPETIIGRGHMPRESVNVLPITADMNSENEKMNLRTIIIIALSSVILLLVLVGAFYIILKWREIRRPSGAVGPAFKSYLNKRSGMEYMLSSRIMSSRSMSLVSTLAHSILSVKTFSFSELEKATAKFSSQRVLGEGGFGRVYCGTLDDGNEVAVKLLTRDGQNRDREFVAEVEILSRLHHRNLVKLIGICIEGPRRYLVYELVHNGSVESHLHGDDKKKSPLNWEARTKIALGAARGLAYLHEDSIPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGKSHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSFGVVLLELLTGRKPVDMSQPQGQENLVMWARPMLRSKEGLEQLVDPSLAGSYDFDDMAKVAAIVSMCVHPEVSQRPFMGEVVQALKLIYNDTNESNNESSAWASDFGGELVFSDSSWLDAEEVTQRLAYGQASTLITMDYSSGHLEMMENRPFSASSFNGDEISLPMGHQVRSDPLRTAQSKLTFYKLTRSQSEHVVHPSKRVWNDDGYWV* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0975 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Gso13g0975 709 ProSiteProfiles Protein kinase domain profile. 311 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0975 709 SUPERFAMILY Protein kinase-like (PK-like) 295 584 IPR011009 -
Gso13g0975 709 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Gso13g0975 709 CDD STKc_IRAK 317 586 - -
Gso13g0975 709 Gene3D Transferase(Phosphotransferase) domain 1 387 605 - -
Gso13g0975 709 PANTHER OS01G0750732 PROTEIN 53 705 - -
Gso13g0975 709 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 53 705 - -
Gso13g0975 709 Gene3D Phosphorylase Kinase; domain 1 284 386 - -
Gso13g0975 709 Pfam Protein tyrosine and serine/threonine kinase 313 583 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0975 Gso-Chr13 24110314 24118811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0975 57 604 Receptor kinase-like Gene Family AT5G56890 56.469 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso13g0975 PK_Tyr_Ser-Thr 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0975 - - gmx:100784243 1345.1