Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0964 ATGACCTTAAATGCATCCAGCAACAATTTCTCTGGCTTTCTTCCTGAGGATTTTGGAAATTTCTCTTCCTTGGAGACTTTGGATCTCAGAGGCAGCTTCTTTGAAGGGTCAATTCCAAAATCCTTCAGTAAATTGCACAAGTTGAAGTTCCTTGGTTTATCTGGGAATAATCTCACTGGGGAAATCCCCGGAGAGCTGGGGAAGCTTTCATCACTGGAATGCATGATCATTGGATACAATAAATTTGAAGGAGGGATTCCAGCAGACTTTGGAAATCTCACCAAGCTGAAGTATCTTGATATAGCAGAAGGCAATCTAGGTGGTGAAATTCCAGCTGAGTTGGGAAAGCTCAAAATGTTGAATACAGTTTTCTTGTACAAAAACAAATTTGAAGGCAAGATTCCATCAGAAATTGGCAACTTGACTTCATTGGTGCAGCTGGATCTCTCAGACAACATGTTATCAGGAAAGATTCCAGCTGAAATAAGTCAGCTGAAGAATTTACAGCTTCTGAACTTCATGCGGAACCGGTTATCAGGTCCTGTGCCTTCTGGCCTTGGGGACTTGCCTCAACTAGAGGTGCTTGAGCTATGGAACAATTCCTTGTCAGGGCCATTGCCTAGAAACCTTGGCAAGAATTCACCATTGCAGTGGTTGGATGTATCATCCAACTTACTCTCTGGTGAGATTCCAGAAACTCTTTGCACCAAGGGCAATCTCACCAAGCTCATACTTTTCAATAATGCTTTCTTGGGTCCAATTCCGGCAAGCCTATCAACATGTCCTTCACTTGTTCGTTTTCGAATTCAGAACAATTTTCTTAATGGAACAATTCCTGTGGGTCTTGGTAAGCTTGGGAAGCTTCAGAGGTTAGAATTGGCTAACAATAGTCTCACTGGTGGAATTCCTGATGACATTGGTTCTTCTACATCCCTTTCTTTCATTGATTTTTCCAGAAACAACCTCCACTCTTCTCTTCCTTCAACCATTATTTCCATTCCAAATCTGCAAACTTTAATTGTCTCCAACAACAGCTTGAGAGGTGAAATCCCTGACCAATTCCAGGATTGTCCCTCACTTGGTGTCCTTGATCTCTCATCAAATCGATTCTCCGGAATCATTCCATCTAGCATTGCATCATGTCAGAAATTGGTAAACTTGAACCTACAGAATAACCAATTGACTGGTGGAATCCCAAAAGAATTAGCAAGCATGCCTACATGGGCCATTCTTGATCTTGCCAACAACACTCTGAGTGGTCATATGCCCGAAAGCTTTGGTATGTCTCCAGCTCTAGAAACATTCAATGTCTCACACAACAAGCTAGAAGGTCATGTCCCAGAAAATGGCATGCTAAGAACAATAAACCCAAATGATCTTGTGGGAAATGCTGGCTTATGTGGTGGTGTTCTCCCTCCATGTGGCCAAACCTCAGCATATCCATTAAGGCATGGGAGCTTACCTGCAAAGCACATTCTTGTAGGATGGATCATTGGAGTATCATCAATACTAGCCATTGGGGTTGCAACTTTGGTAGCAAGATCTTTATACATGATGCGGTACACTGATGGATTGTGCTTCCCAGAAAGATTTTATAAGGGTAGGAAGGTGTTGCCTTGGAGATTGATGGCCTTCCAGAGGCTTGATTTTACAAGTAGTGACATTTTATCTTGCATCAAGGATACAAATATGATTGGCATGGGAGCAACTGGGGTTGTTTACAAGGCTGAGATACCACAATCAAGTACAATTGTGGCAGTCAAAAAGTTGAGGAGATCAGGATCTGATATTGAAGTAGGAAGCAGTGATGACCTTGTTGGAGAGGTGAATCTTTTAAGGAGGCTAAGGCATAGGAACATTGTTAGACTACTAGGCTTTCTTTACAATGACGCTGATGTGATGATAGTTTATGAATTTATGCACAATGGAAACCTTGGAGATGCCCTGCATGGTAAACAAGCTGGGAGATTGCTTGTAGACTGGGTTTCCCGATATAACATAGCTCTAGGAATAGCACAAGGACTTGCTTATCTTCATCATGACTGTCATCCACCTGTTATCCATCAAGACATCAAGTCAAATAATATACCGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGATTGGCCAAGATGATGCTCTGGAAGAATGAAACAGTCTCCATGATTGCTGGATCCTATGGATATATTGCCCCAGAATACGGATACTCCTTGAAAGTGGATGAAAAGATTGACATTTACAGTTATGGAGTGGTTCTGTTGGAGCTTCTCACCGGAAAGCGGTCATTAGATCCTGAGTTTGGAGAATCTATAGACATAGTAGGGTGGATTAGAAGGAAGATAGACAACAAATCTCCGGAAGAAGCATTAGACCCCAGTGTAGGAAACCGCAAGCATGTTCAAGAATAG 2415 0.4211 MTLNASSNNFSGFLPEDFGNFSSLETLDLRGSFFEGSIPKSFSKLHKLKFLGLSGNNLTGEIPGELGKLSSLECMIIGYNKFEGGIPADFGNLTKLKYLDIAEGNLGGEIPAELGKLKMLNTVFLYKNKFEGKIPSEIGNLTSLVQLDLSDNMLSGKIPAEISQLKNLQLLNFMRNRLSGPVPSGLGDLPQLEVLELWNNSLSGPLPRNLGKNSPLQWLDVSSNLLSGEIPETLCTKGNLTKLILFNNAFLGPIPASLSTCPSLVRFRIQNNFLNGTIPVGLGKLGKLQRLELANNSLTGGIPDDIGSSTSLSFIDFSRNNLHSSLPSTIISIPNLQTLIVSNNSLRGEIPDQFQDCPSLGVLDLSSNRFSGIIPSSIASCQKLVNLNLQNNQLTGGIPKELASMPTWAILDLANNTLSGHMPESFGMSPALETFNVSHNKLEGHVPENGMLRTINPNDLVGNAGLCGGVLPPCGQTSAYPLRHGSLPAKHILVGWIIGVSSILAIGVATLVARSLYMMRYTDGLCFPERFYKGRKVLPWRLMAFQRLDFTSSDILSCIKDTNMIGMGATGVVYKAEIPQSSTIVAVKKLRRSGSDIEVGSSDDLVGEVNLLRRLRHRNIVRLLGFLYNDADVMIVYEFMHNGNLGDALHGKQAGRLLVDWVSRYNIALGIAQGLAYLHHDCHPPVIHQDIKSNNIPLDANLEARIADFGLAKMMLWKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSYGVVLLELLTGKRSLDPEFGESIDIVGWIRRKIDNKSPEEALDPSVGNRKHVQE* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0964 804 Gene3D Ribonuclease Inhibitor 1 86 IPR032675 -
Gso13g0964 804 Gene3D Ribonuclease Inhibitor 185 480 IPR032675 -
Gso13g0964 804 Gene3D Phosphorylase Kinase; domain 1 559 643 - -
Gso13g0964 804 Pfam Leucine rich repeat 334 394 IPR001611 GO:0005515
Gso13g0964 804 Pfam Leucine rich repeat 2 58 IPR001611 GO:0005515
Gso13g0964 804 Gene3D Ribonuclease Inhibitor 87 184 IPR032675 -
Gso13g0964 804 SUPERFAMILY L domain-like 255 456 - -
Gso13g0964 804 ProSitePatterns Protein kinases ATP-binding region signature. 565 589 IPR017441 GO:0005524
Gso13g0964 804 Pfam Protein kinase domain 561 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0964 804 SMART LRR_typ_2 45 69 IPR003591 -
Gso13g0964 804 SMART LRR_typ_2 189 213 IPR003591 -
Gso13g0964 804 SMART LRR_typ_2 285 309 IPR003591 -
Gso13g0964 804 SMART LRR_typ_2 357 380 IPR003591 -
Gso13g0964 804 SMART LRR_typ_2 333 356 IPR003591 -
Gso13g0964 804 SMART LRR_typ_2 141 165 IPR003591 -
Gso13g0964 804 ProSiteProfiles Protein kinase domain profile. 559 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0964 804 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 796 - -
Gso13g0964 804 SMART serkin_6 559 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0964 804 PANTHER UNNAMED PRODUCT 1 796 - -
Gso13g0964 804 SUPERFAMILY RNI-like 3 323 - -
Gso13g0964 804 SUPERFAMILY Protein kinase-like (PK-like) 554 775 IPR011009 -
Gso13g0964 804 Gene3D Transferase(Phosphotransferase) domain 1 644 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0964 Gso-Chr13 24017361 24021056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0964 3 804 Receptor kinase-like Gene Family AT1G08590 60.684 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso13g0964 Pkinase 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0964 - - gmx:100788430 1471.83