Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0963 ATGTCAACTGTGTCGAAAGATGACAACTTGGTGCTGTCTTCGGAGGACTCTTCGTGCCCAGAAGAGTCTGAGCTTGAATTGGGTCTTGGCTTGAGCCTCTCTTCTGGCCCTTCATCAAAGTCTCATCACCACCATGTTCATGCTCCTACAACTCTTTATGCTAGAATTTACACTGCTAAGGATTTTCCTTCTTCCGCAGCAGCAGCATCATCATCACCTTCCTCTTCTTCCTCTTCGTCTCCCAACATCACTGCCGGCACCAAGAGAGCTGCTGCTGATTCTCTTGTTGCCAATAACCGTCCCGGTCAAGTAGTTGGATGGCCTCCACTTCGAACATATAGAGTGAATAGCTTCAATAGCCATGCAAAATCAACTGAAGTATTCAACTCTGTGGCTGAGAAGAGTAAGATAAATAATACTGTGGTCAGGAAGACTAATGACAATGACAATGATAATAACATAAATGCCAAAGAAAAAAGACACCTCAGGAGTTCCCTGTTCGTCAAGGTAAATATGGACGGGATACCAATTGGAAGGAAGGTTGATTTGAGTGCCCATAGTTCCTATGAAACCTTAGCACAAACATTGGAGGATATGTTTAATGAATCAACTACAGTCACCACTTGCAAAGGATCAAATGGTGAGGATTATGGCATTATTATCGGAGGAGAAAGACATTCAAAATTGTTGGATGGATCTTCCAAGTTTGTGCTCACTTATGAAGACAAGGAAGGAGATTGGATGCTTGTTGGGGATGTTCCCTGGGGGATGTTCCTTAGCTCGGTGAGGAGGCTAAGAATCATGAGGACATCTGAGGCTAATGGACTTGCACCAAGATTGGAAGAAAACATCAAACAGAGATGCAAGCCCATATAG 876 0.4372 MSTVSKDDNLVLSSEDSSCPEESELELGLGLSLSSGPSSKSHHHHVHAPTTLYARIYTAKDFPSSAAAASSSPSSSSSSSPNITAGTKRAAADSLVANNRPGQVVGWPPLRTYRVNSFNSHAKSTEVFNSVAEKSKINNTVVRKTNDNDNDNNINAKEKRHLRSSLFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGIIIGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAPRLEENIKQRCKPI* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0963 291 Gene3D - 160 282 - -
Gso13g0963 291 MobiDBLite consensus disorder prediction 1 46 - -
Gso13g0963 291 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 282 IPR003311 GO:0005634|GO:0006355
Gso13g0963 291 MobiDBLite consensus disorder prediction 65 101 - -
Gso13g0963 291 SUPERFAMILY CAD & PB1 domains 160 268 - -
Gso13g0963 291 PANTHER AUXIN-RESPONSIVE PROTEIN IAA11 8 282 - -
Gso13g0963 291 ProSiteProfiles PB1 domain profile. 165 272 IPR000270 GO:0005515
Gso13g0963 291 Pfam AUX/IAA family 60 279 IPR033389 -
Gso13g0963 291 MobiDBLite consensus disorder prediction 1 18 - -
Gso13g0963 291 MobiDBLite consensus disorder prediction 65 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0963 Gso-Chr13 24012792 24016843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0963 158 279 B3 DNA Binding Superfamily AT1G59750 33.607 8.95e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gso13g0963 AUX_IAA 8.3e-63 CL0072