Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0958 ATGACAAATAGTCTGGTTTGGGTACCAGTAACAAAAATCAAGGAAATAATGGAAGCACATCCTACTTTCTCCATTGAAAGATCAAAGCAACTCAATAACATGGGGATGTCTGGAGCACTTTCTTCATCCTTGTCAATCCTTCCAATACCCCCAGAAGAGATGTTTCCCAAGCTGCCTCAATCACAATTGGATTTTGTAGAACAAGAGCTTATGACAAGACCTTTTACTCATTCAAGTTATTTAAATTCCGGTGGAGTAGTTGGGCATATTTTTTCGTCTTCCCCTGGATATTCAACTGATCTTCATCACTCATCTCTTTCACCTGATGAAAAACACTCTACTAATGCTCATTTGATTTCACAATCATCAACTAACATCACCCAATTTCCATTATCATATTCTTCAAATACTGGACCACCAACTTCAGCAACACCAAGCCATTATTCCAAAGAAAGCAGTGTTTCCTGGCATACAGATTCCCTGCCAAGCTTTCTGGATTTTCCTGAAAATGGCTCTATTGATAATAATCGGGTAGAAAGTAGTGCCTGCCCTATAATGGCATCTGAGGAGTATTCTAAGCAAAATGATTGGCAGGAGTGGGCTGAGAGGCTAATCAGCGATGATGACACTTTGACTACTAATTGGAATGACCTTCTTGCTGACAACATTCAAGATCTTGAGCCAAAGATTCCAGGACATCAATCCCAAGGTCATCAACAACTTCCTGCTTCATATGGAGAGAATTGCATTGGTGCTGCCCTCTCTTCCTCAGCAAATTTTGCTCCTGCTAAGTCACGAATGCGTTGGACACCAGAACTTCATGAGGCGTTTGTGGAGGCTGTCAACCAACTTGGGGGGAGTGAAAAAGCTACTCCAAAGGGCGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCATTTGCAGAAATACAGGACAGCTAGATATAGACCGGAGTCATCTGAAGGAGTTATGGAGAAAAAAACAAGTTCCGTTGAAGAGATGGCATCTCTAGATTTGAGAACTGGTATTGAGATCACTGAAGCTCTACGACTACAAATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTACCTCCAGATGATGTTTGAGAAGCAATGTAAACCTGGAAATGAAACGTTCAAGGCACCATCATCTATCATTGAGACTCCATCTGGGGGGTCTTCAAATGCTACGAAAGATTCCCTTGCCAAAAATGAAATGGAAGCATCACAAGTGAACCATGGCAGGTCAGGACCTGATCAGGTTAAGGGCAGTACGACATTTGAGGAAGGCTCATTGGAAAAGTGCGGGAAGCCTGATTCTCCCAAAACTGAACATGCTATTGCTAGTGAAGATAGTGCTCAAGCCCCGAAGCGTCAAAGAACTGAGTAA 1455 0.4206 MTNSLVWVPVTKIKEIMEAHPTFSIERSKQLNNMGMSGALSSSLSILPIPPEEMFPKLPQSQLDFVEQELMTRPFTHSSYLNSGGVVGHIFSSSPGYSTDLHHSSLSPDEKHSTNAHLISQSSTNITQFPLSYSSNTGPPTSATPSHYSKESSVSWHTDSLPSFLDFPENGSIDNNRVESSACPIMASEEYSKQNDWQEWAERLISDDDTLTTNWNDLLADNIQDLEPKIPGHQSQGHQQLPASYGENCIGAALSSSANFAPAKSRMRWTPELHEAFVEAVNQLGGSEKATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVMEKKTSSVEEMASLDLRTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPGNETFKAPSSIIETPSGGSSNATKDSLAKNEMEASQVNHGRSGPDQVKGSTTFEEGSLEKCGKPDSPKTEHAIASEDSAQAPKRQRTE* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0958 484 MobiDBLite consensus disorder prediction 397 484 - -
Gso13g0958 484 SUPERFAMILY Homeodomain-like 262 318 IPR009057 -
Gso13g0958 484 Pfam MYB-CC type transfactor, LHEQLE motif 349 395 IPR025756 -
Gso13g0958 484 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 261 321 IPR017930 -
Gso13g0958 484 MobiDBLite consensus disorder prediction 454 468 - -
Gso13g0958 484 MobiDBLite consensus disorder prediction 399 449 - -
Gso13g0958 484 Gene3D - 263 322 - -
Gso13g0958 484 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL4-RELATED 39 482 - -
Gso13g0958 484 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 39 482 IPR044848 GO:0003700
Gso13g0958 484 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 264 318 IPR006447 GO:0003677
Gso13g0958 484 Pfam Myb-like DNA-binding domain 266 317 IPR001005 -
Gso13g0958 484 Coils Coil 352 372 - -
Gso13g0958 484 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0958 Gso-Chr13 23956981 23963719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0958 69 393 G2-like Transcription Factor Family AT4G28610 52.522 5.91e-99 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso13g0958 Myb_DNA-binding 9.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0958 - - gmx:100793593 900.582