Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0957 ATGGCCATGAGTGCAGCCTTAAACACTGGTTCTCACTCCCGAAATGGATTTCGTTACTCGGACGAGGAAAATGGAGATTTCAATCAACAGCAGTGGCAACATAATGATGATCAAGCATTGTCTGCGGCAGGAAGCGTTGCTAATGAGGATTTTGAAGGGCCGAAAGCATACTACAGCAATCCAAGGAAACGCAAAGACGAGAGAAGTTTAACGAGCAATGACCAAGGAGAAGATGACTACCTATTGGCCGAGTCAAGGCAACCTTTGTGGCGCAAAGTTCCAATATCTTCAAGCCTAATCAACCCTTATCGCATAGTCATAATCATGCGTCTCATTATCCTAGTTTTCTTCTTCCACTTGCGCATAACAACTCCAGTGCATGATGCACTTGCCTTATGGATAATCTCTGTAGTCTGTGAAATCTGGCTTGCATTGTCTTGGCTAGTAGACCAAATCCCCAAGTGGTTCCCTATTACTCGTGAAACTTACCTTGAACGTTTGTCCATAAGATTTGAGCGCGAAGGGGAGCCAAACCTTCTATCACCAGTTGATATCTTTGTGACCACTGCAGACCCTTTGAAGGAACCACCTATTATAACTGCAAACACGGTTCTGTCAGTGTTGTCTGTTGATTATCCTGTTGTAAAAGTTAGCTGCTATGTCTCAGATGACAGTGCATCTATGCTTCTCTTTGATACCTTGTTAGAAACTGCTGAGTTTGCTAGAATATGGGTTCCCTTTTGTAATAAGTATAACATTGAGCCAAGGGCACCTGAGTTTTATTTCTCTCAGAAACTTGATTACTTGAAAGATAAGGTGCACCCAACATTTGTTAAGGATCGCAGGGCAATGAAGAGAGAGTATGAAGAATTCAAGGTGAAAATTAATGTATTGGTTGCAAAGGCTCAGAAAAAACCAGAAGAGGGGTGGGTGATGCAAGATGGTAATCCATGGCCTGGGAACAACATTGATGACCATCCAGGAATGATTCAGGTATGTCTAGGAAGTGCTGGTGCACTGGACATAGAAGGCAAGGAACTGCCAAGGCTTGTGTATGTTTCTCGGGAAAAACGTCCCGGTTATCAACACCACAGTAAAGCTGGTGCCTCGAATGCTCTGGTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGCATTGAATTTGGATTGTGACCAATACATCAATAATAGCAAGGTTCTTAGGGAGGCTATGTGCTTTTTAATGGATCCCCAAATTGGAAAGAAGTTCTGTTATGTCCAATTTCCACGAAGGTTTGATGGCATTGATTGCAATGACAGATATGCTAATCACAATACTGTGTTCTTTGATATCAACATGAAATGCCTTGACGGGATTCAAGGCCCTATGTATGTTGGTACTGGATGTGTGTTCAACAGGCAGGCATTATATGGCCGTGAGCCACCTTCTGATAAAAGGCCGAAGATGAAGAGTTGCAGCTGGCCTTCATGCTGCAGCTGTTGTTCTGGTGACTCTCAGTCTTCATCTGATGATGACGAGACTGATCAAGAGCTTGAGGACTTTGATGAGGATGAGGAAGAGGAATTACCCTTCATGTCTCTGAAAAGTTTAGAGAAACGATTTGGACAATCACCAGTTTTCATTTCTTCTGCTTTGATAGAAGATGGTGGACTTCCAAAAGGAACCGATGCTCAATTACTGATTAAGGAAGCAATTCATGTTATAAGCTGTGACTACGAAGAGAAAACTGAATGGGGAAGAGAGATTGGGTGGCTTTATGGTTCAGTCACAGAAGACCTCTTAACAGGGTTTAACATGCATTGTAGAGGATGGAAATCAGTGTACTGCATGCCAAAGAAAGCAGCTTTCAAGGGATCTGCTCCTATAAATCTATCAGACCGATTACACCAAGTTCTGAAATGGGCTTCAGGTTCTACTGAGATTTTCTTTAGTGGTTATTGCCCTTTGTGGTATGGTTATGGCGGAAAACTGAAATGGCTGCAGAGATTGGCCTACACTAATTCCGTTGTCTATCCGTTCACTTCCATCCCTTTGTTGATCTACTGTGCAATTCCAGCTGTTTGTCTTCTGACTGGAAAATTCATCATCCCCACTCTGTCAAACCTTGCTAGCATTTGGTTAATGGCCTTATTTATCTCCATCATCTTAACCTGTGTGCTAGAGCTTCGCTGGAGTGGGGTTAGCATTCAGGACTGGTGGCGCAACGAGCAATTTTGGGTCATTGGGGGAGTTTCTGCACACTTTTTTGCTGTATTTCAAGGTCTCCTTAAAGTTGGTGGAGTACACACTAATTTCAATGTGAGAGCAAAATCAGCAAATGACACTGCATTTGGACAGCTCTATCTCTTCAAGTGGACTACTCTTCTCATCCCACCAACGAGTCTTGTAATATTAAATATGGTGGGAATTGTGGCTGGAATCTCTGATGCCATTAACAATGGCTATGACTCATGGGGACCTTTCTTTGGGAAGCTTTTCTTCTCCTTGTGGGTCATTGTGCACTTGTATCCTTTCCTCAAAGGCTTAATGGGAAGGCAAAACAGAACCCCTACCATTGTAGTCCTCTGGTCAATACTTCTAGCCATAATTTTCTCAATGATTTGGGTGCGAATTGATATTTTCTTGCCTAAGCAGACAGGTCCAGCACTCAAACAGTGTGGGATAAGATGCTAA 2676 0.4294 MAMSAALNTGSHSRNGFRYSDEENGDFNQQQWQHNDDQALSAAGSVANEDFEGPKAYYSNPRKRKDERSLTSNDQGEDDYLLAESRQPLWRKVPISSSLINPYRIVIIMRLIILVFFFHLRITTPVHDALALWIISVVCEIWLALSWLVDQIPKWFPITRETYLERLSIRFEREGEPNLLSPVDIFVTTADPLKEPPIITANTVLSVLSVDYPVVKVSCYVSDDSASMLLFDTLLETAEFARIWVPFCNKYNIEPRAPEFYFSQKLDYLKDKVHPTFVKDRRAMKREYEEFKVKINVLVAKAQKKPEEGWVMQDGNPWPGNNIDDHPGMIQVCLGSAGALDIEGKELPRLVYVSREKRPGYQHHSKAGASNALVRVSAVLSNAPFALNLDCDQYINNSKVLREAMCFLMDPQIGKKFCYVQFPRRFDGIDCNDRYANHNTVFFDINMKCLDGIQGPMYVGTGCVFNRQALYGREPPSDKRPKMKSCSWPSCCSCCSGDSQSSSDDDETDQELEDFDEDEEEELPFMSLKSLEKRFGQSPVFISSALIEDGGLPKGTDAQLLIKEAIHVISCDYEEKTEWGREIGWLYGSVTEDLLTGFNMHCRGWKSVYCMPKKAAFKGSAPINLSDRLHQVLKWASGSTEIFFSGYCPLWYGYGGKLKWLQRLAYTNSVVYPFTSIPLLIYCAIPAVCLLTGKFIIPTLSNLASIWLMALFISIILTCVLELRWSGVSIQDWWRNEQFWVIGGVSAHFFAVFQGLLKVGGVHTNFNVRAKSANDTAFGQLYLFKWTTLLIPPTSLVILNMVGIVAGISDAINNGYDSWGPFFGKLFFSLWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLAIIFSMIWVRIDIFLPKQTGPALKQCGIRC* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0957 891 MobiDBLite consensus disorder prediction 56 77 - -
Gso13g0957 891 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 891 - -
Gso13g0957 891 Pfam Cellulose synthase 183 885 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gso13g0957 891 SUPERFAMILY Nucleotide-diphospho-sugar transferases 198 707 IPR029044 -
Gso13g0957 891 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 1 891 - -
Gso13g0957 891 MobiDBLite consensus disorder prediction 1 15 - -
Gso13g0957 891 MobiDBLite consensus disorder prediction 497 521 - -
Gso13g0957 891 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 294 473 IPR029044 -
Gso13g0957 891 MobiDBLite consensus disorder prediction 502 521 - -
Gso13g0957 891 MobiDBLite consensus disorder prediction 22 42 - -
Gso13g0957 891 MobiDBLite consensus disorder prediction 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0957 Gso-Chr13 23928511 23933408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0957 62 891 Cell Wall Biosynthesis AT5G17420 69.121 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0957 K10999 - gmx:100777278 1755.73