Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0945 ATGGATTCTGCAAGGAGTTGGCTTCAGAAGTTCCAGCCTCGAGATAAAACCAGGGCTGCTGGGAAGAAAAAGGAGGAGGATGGTAATGGAGGAAACCAGGATTCGAATGAACCCGTGGATGAAGCATTGTTATCCAGTGTCACGAAGCAGAAGGTGGCAGCAACAAAGCAGTACATTGAAAATCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAGGATCAAAACAACCTGCTTAAATTTTTAGAGAAAAAGGAAACTGAATATATGCGCCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTGACAATGATTGGGAAAGGTGCATTTGGGGAGGTCAGAGTCTGTAGGGAGAAAACTAGTGATCATGTATATGCAATGAAGAAGCTGAAAAAATCAGAGATGCTTCGTAGAGGCCAGGTTGAGCATGTTAAAGCTGAAAGGAATCTCCTCGCAGAGGTTGACAGAAATTGCATAGTCAAGCTTTATTGTTCTTTCCAAGATGATGAATATTTGTATCTTATTATGGAGTATCTACCGGGTGGGGATATGATGACTCTACTTATGAGAAAGGATACCTTGACTGAAGATGAAGCCAGATTTTATGTAGGAGAAACAATTTTGGCTATTGAATCTATACATAAGCACAATTATATACATAGGGATATCAAGCCAGACAACTTACTACTTGATAGATATGGACACTTGAAATTGTCAGATTTTGGACTTTGTAAACCATTAGATTGTAGTGCACTTGAAGAAAAGGATTTTTCTGTGGGTCAGAATGTGAATGGATCTACACAAAGCTCAACTCCTAAACGCTCACAACAGGAACAACTGCAACATTGGCAAATGAACAGGAGGACACTTGCTTATTCCACAGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTTTTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTGGGAGCTATTATGTACGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTTAACATGTAGGAAGATAGTAAATTGGAAAACTTACTTGAAATTTCCTGAAGAAGCTAGGCTATCCCCAGAAGCTAAAGATCTTATTAGTAAACTTTTGTGTAATGTCAATCAAAGGCTGGGGTCAAAAGGTGCAGATGAAATAAAGGCTCATCCATTCTTCAAAGGTGTTGAATGGGATAAGCTCTATCAAATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAGTTAGATACTCAGAATTTTGAAAAGTTTGATGAGTCTGACAGCCAAAATCAATCATCATCAAGATCTGGTCCATGGAGGAAGATGCTTTCATCTAAGGACTTGAATTTTGTTGGATACACTTACAAGAACTTTGAAATTGTCAATGATTATCAAGTTCCTGGGATAGCTGAACTGAAGAAGAAACAGTCCAAACCAAAGAGGCCAACCATCAAGTCACTTTTCGATTGTGAATCAGAAACATCAGAGGGGTCTGATACTGATACTTCTGCAAATGATCAACCTGCTCAAGGAAGCTTTTTGAAGCTCTTGCCACCCCAGTTAGAGGTATCTCCTCATCGCAACAAGAATCTTCCTCCCAGGTCCTAA 1680 0.3988 MDSARSWLQKFQPRDKTRAAGKKKEEDGNGGNQDSNEPVDEALLSSVTKQKVAATKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTSDHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDRNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETILAIESIHKHNYIHRDIKPDNLLLDRYGHLKLSDFGLCKPLDCSALEEKDFSVGQNVNGSTQSSTPKRSQQEQLQHWQMNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMLTCRKIVNWKTYLKFPEEARLSPEAKDLISKLLCNVNQRLGSKGADEIKAHPFFKGVEWDKLYQMEAAFIPEVNDELDTQNFEKFDESDSQNQSSSRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGIAELKKKQSKPKRPTIKSLFDCESETSEGSDTDTSANDQPAQGSFLKLLPPQLEVSPHRNKNLPPRS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0945 559 MobiDBLite consensus disorder prediction 512 534 - -
Gso13g0945 559 MobiDBLite consensus disorder prediction 9 31 - -
Gso13g0945 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Gso13g0945 559 MobiDBLite consensus disorder prediction 1 40 - -
Gso13g0945 559 Pfam Protein kinase domain 122 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0945 559 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 530 - -
Gso13g0945 559 Pfam Protein kinase C terminal domain 435 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Gso13g0945 559 MobiDBLite consensus disorder prediction 497 511 - -
Gso13g0945 559 Gene3D Transferase(Phosphotransferase) domain 1 205 434 - -
Gso13g0945 559 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Gso13g0945 559 ProSiteProfiles Protein kinase domain profile. 121 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0945 559 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 530 - -
Gso13g0945 559 Gene3D Phosphorylase Kinase; domain 1 119 445 - -
Gso13g0945 559 SMART pkinase_C_6 417 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso13g0945 559 MobiDBLite consensus disorder prediction 496 559 - -
Gso13g0945 559 SMART serkin_6 121 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0945 559 SUPERFAMILY Protein kinase-like (PK-like) 94 469 IPR011009 -
Gso13g0945 559 CDD STKc_NDR_like 119 480 - -
Gso13g0945 559 Coils Coil 63 83 - -
Gso13g0945 559 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0945 Gso-Chr13 23828529 23836802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0945 1 553 AGC Kinase Gene Family AT3G23310 74.776 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Gso13g0945 Pkinase 1.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0945 K08790 - gmx:100820558 1114.37