Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0944 ATGAATAGCTCCCTCTCTGGCAATGGTGGTTCCACAACAATGGCGGCAGAAAACGAAGATTCCTGCGGAATCCGCGTCACCGGCATGCAATTCTCCTACGACGTGCAGCAACCGCCGCTCTTCCTCGACTTCAACCTCAACGTCTCTCCCGGATCCCGCTGCCTCCTCGTCGGTGCCAATGGATCCGGAAAGACGACTTTGCTGAAGATTCTGGCGGGGAAGCACATGGTTGGAGGAAGAGACGTTGTGCGCGTCTTGAGTGGTTCCGCTTTTCACGACACTCAGCTCGTTTGTAGCGGAGATCTCGCTTATTTGGGCGGATCTTGGAGCAAAAACGTTGGCTCCGCTGGAGAAATTCCGCTCCAAGGAGACTTCTCTGCTGAACATATGATCTTTGGAGTTGAGGGTGCTGATCCAGAAAGGAGAGATAAGTTAATTGAGCTGCTTGATATTGATCTACAGTGGCGAATGCATAAGGTATCTGATGGGCAGCGGCGTCGAGTGCAAATCTGTCTTGGTCTTCTTCATCCGTACAAGGTTCTCTTGCTGGATGAGGTTACTGTGGATCTGGATGTTGTTACTCGGATGGATTTATTGGACTTCTTTAAGGAAGAATGTGAACAGAGAGAAGCTATAATCGTATATGCAACTCATATTTTTGATGGACTGGAGACATGGGCAACTCATTTGGCATACATACAAGATGGTGAACTGAGAAGAGCAGAAAAAATATCAAATGTTAACGAGTTGAAATCTTCAACTAATCTGCTGTCTGTTGTTGAGGCCTGGCTTCGCGCTGAAACAAAGCTTGAAAAGAAGAACCCTGTCCAAAAGACTTCTGTTGCCAGTTCTCCTTTCTTTTCATCTAGACACATGGCATACTATAGATAG 891 0.4725 MNSSLSGNGGSTTMAAENEDSCGIRVTGMQFSYDVQQPPLFLDFNLNVSPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLSGSAFHDTQLVCSGDLAYLGGSWSKNVGSAGEIPLQGDFSAEHMIFGVEGADPERRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPYKVLLLDEVTVDLDVVTRMDLLDFFKEECEQREAIIVYATHIFDGLETWATHLAYIQDGELRRAEKISNVNELKSSTNLLSVVEAWLRAETKLEKKNPVQKTSVASSPFFSSRHMAYYR* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0944 296 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 20 296 - -
Gso13g0944 296 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 260 IPR003439 GO:0005524
Gso13g0944 296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 248 IPR027417 -
Gso13g0944 296 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 20 296 - -
Gso13g0944 296 SMART AAA_5 50 237 IPR003593 -
Gso13g0944 296 Gene3D - 23 282 IPR027417 -
Gso13g0944 296 Pfam ABC transporter 43 187 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0944 Gso-Chr13 23814703 23818777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0944 24 252 Calmodulin-binding Proteins AT2G36910 23.361 5.41e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0944 K12608 - gmx:100788503 579.711