Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0929 ATGGTTTCGCTACCAACATGGTTTCGCTACTTTCACCACAAGGTCGGATACTCCGTTTCCCTCGCCGTGAAGAACAATAAAGGAGATCCAATCACAGCCAGAGAGATAAATGATGCTGTTTGGAAAAACTTCTTTCTAGGAAAGCTGACATACTTGCTCTGGAATAAAGGAGAGGAGATGGCCCCTACTATTGATGGAAAAGCAGTAACTCTTGTTCGGAAATTACCAGCTGTAGACCCAACGAGTGTTTTTGTAGGAGATGTTGTGGTTATGAAGGACCCTGAGAAGCCAGATAACTACCTACTCAGAAGATTAACTGCAATTGAAGGCTATGAAGTGGTTTCTACTGATGAAAAGGATGAACCCTTTATTCTTGAGAAGGATCAATGCTGGGTAGAGGCTGAAAATGAAAAATTGAATGCCAAGGAAGCCAAGGATAGCCGAACATTTGGTCCAGTTCAGATGACAGACATTGTAGGCAGAGTCATATATTGCCTGCGAAGTGCTGTAGACCATGGCCGTGTACAAAACAGTGATTTCGGCATGCGAAACGATACACCAGTGCTGGAAGTGGAACTTGATGTTGATGAGATGGCAAAGAGTCACAAAGCCTGA 615 0.4374 MVSLPTWFRYFHHKVGYSVSLAVKNNKGDPITAREINDAVWKNFFLGKLTYLLWNKGEEMAPTIDGKAVTLVRKLPAVDPTSVFVGDVVVMKDPEKPDNYLLRRLTAIEGYEVVSTDEKDEPFILEKDQCWVEAENEKLNAKEAKDSRTFGPVQMTDIVGRVIYCLRSAVDHGRVQNSDFGMRNDTPVLEVELDVDEMAKSHKA* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0929 204 CDD S26_SPase_I 56 162 IPR019533 GO:0004252|GO:0006465
Gso13g0929 204 Gene3D Umud Fragment, subunit A 49 180 - -
Gso13g0929 204 PANTHER OSJNBA0068L06.9 PROTEIN 1 204 - -
Gso13g0929 204 SUPERFAMILY LexA/Signal peptidase 57 175 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0929 Gso-Chr13 23642000 23646254 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0929 86 173 MADS-box Gene Family AT1G29960 30.108 4.41e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0929 - - gmx:100785852 411.764