Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0909 ATGTCTAACAATGAATGTGCATTTGGGGTGGTGTATGTGAAATTCAAGCCTCACCTTCTCATGGTTCTAGTTCAGCTGGTTCTTTCGTTTCTCTACTTCCTAGTAGAGGCTTCATTAAACAAAGGGATGAACCCTCATGTCTTTGTTACCTATCGGCATGCTGTTGGGGGCATAGTTGTGCTTCCTTTTGCTTACATTCGTGAAAGAAAAACATGGCCAAAGTTGACTTTGACGATGTTCGTGGAGCTATTTTTTCTTTCCCTCTTCGGGATCAGTCTTACTCTGAACATGTTTTTTGAAAGCTTGAAGTATACCACTCCTTCCTTTGTTGCATCCATGATTAATACAATCTCACCCCTTACTTTTATAATTGCAGTTGGACTCAGGCTAGAGGTTGTTGATGTTAAGAAGCCTCGTGGGATGGCTAGAGTTTTTGGAACTGTATTATCTTTGATTGGTGCCTTGATAATGACTTTGTATAAAGGGCATACGATACAAAGCTTACGGGGTGCACCCTTCAATGTCAGAGGCAAATTGGTTCATAATAACTGGATTAAAGGATCGATTTTGTCTGTTGCAAGTTGCATATCATGGTCTTTATGGTACATACTACAGGCAATCATAGTGAAGAAATATCCAGCACAACTGTCACTAACAGCATGGATAAATTGCATGGGTGCAGCCCAGTCTGCTGCCTTTACTGTACTCGTGCAACGCAAGCCCACAGCATGGTTCATTACATCCACTGTTGAACTCTGTTGCATTTTTTATGCAGGAGTTATATGTGGTGGTTTTGTTATATTCGGTCAATTCTGGACCGCAGAACAAAAAGGGCCAGTCTTTGTGAGCATGTTTAATCCCCTTGGAACAATTTTGGTGGCAATTCTAGCATACTTTGTTTTTGGGGAACAACTTCACACTGGCAGTTTATTGGGAGTGGTCATTGTTATCATCGGCCTATACTTGCTATTATGGGGAAAAGAAAGTGACGGAGATTACAAGTCACAACAATCTTTTCCAACTCATGTTGAGCAGAAGGAATATAGGACGCAGATAAAGACTTCAGCTGAGGAAGAGGTACCACAGAGGAGCGTATCACATGCCACAAATTAA 1113 0.4133 MSNNECAFGVVYVKFKPHLLMVLVQLVLSFLYFLVEASLNKGMNPHVFVTYRHAVGGIVVLPFAYIRERKTWPKLTLTMFVELFFLSLFGISLTLNMFFESLKYTTPSFVASMINTISPLTFIIAVGLRLEVVDVKKPRGMARVFGTVLSLIGALIMTLYKGHTIQSLRGAPFNVRGKLVHNNWIKGSILSVASCISWSLWYILQAIIVKKYPAQLSLTAWINCMGAAQSAAFTVLVQRKPTAWFITSTVELCCIFYAGVICGGFVIFGQFWTAEQKGPVFVSMFNPLGTILVAILAYFVFGEQLHTGSLLGVVIVIIGLYLLLWGKESDGDYKSQQSFPTHVEQKEYRTQIKTSAEEEVPQRSVSHATN* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0909 370 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Gso13g0909 370 Pfam EamA-like transporter family 19 158 IPR000620 GO:0016020|GO:0016021
Gso13g0909 370 PANTHER WAT1-RELATED PROTEIN 11 355 IPR030184 GO:0016021|GO:0022857
Gso13g0909 370 PANTHER WAT1-RELATED PROTEIN 11 355 - -
Gso13g0909 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 162 - -
Gso13g0909 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0909 Gso-Chr13 23440467 23442827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0909 14 366 Nodulin-like Gene Family AT2G37460 35.294 9.62e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0909 - - gmx:100808275 724.931