Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0861 ATGGGAGGTTTAGCTAAGAAGATAACTCATCATCTGGTGACCCTGGTGCTGGTAATAGTATTGTGCACCACTATTGTTGAAGGCACCAAACATGTAAGCATCAAGAACAGACTAGGATCTGGGAGGAACATGACCTTGCATTGCCAGTCCAAAGATAATGATCTGGGCAAACAAAACATAGCATACGGGGACGAATTTGGATGGGACTTCTCTGACAATGTTGCTGGAACCACACTGTTTTTCTGTGATTTGGGATGGGAAAATGTTGAGGAGTTCCATTTTGATGCGTATTCCTTTGCCAGGGACAGGGTACGATGTGGTGATGCTGGATGTTCATGGCTAGTATCGATTGAAGGCATTTATGGCTTAAATGAACAAACGGGGTACTGGGAATTCATGTACCAATGGCCAAATTGA 417 0.4388 MGGLAKKITHHLVTLVLVIVLCTTIVEGTKHVSIKNRLGSGRNMTLHCQSKDNDLGKQNIAYGDEFGWDFSDNVAGTTLFFCDLGWENVEEFHFDAYSFARDRVRCGDAGCSWLVSIEGIYGLNEQTGYWEFMYQWPN* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0861 138 PANTHER - 15 121 IPR010264 -
Gso13g0861 138 Pfam Plant self-incompatibility protein S1 31 136 IPR010264 -
Gso13g0861 138 PANTHER PUMILIO HOMOLOG 15-LIKE 15 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0861 Gso-Chr13 22924148 22924603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0861 32 136 Carbohydrate Esterase AT3G16970 35.185 2.54e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0861 - - gmx:102670225 278.1