LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso13g0861	ATGGGAGGTTTAGCTAAGAAGATAACTCATCATCTGGTGACCCTGGTGCTGGTAATAGTATTGTGCACCACTATTGTTGAAGGCACCAAACATGTAAGCATCAAGAACAGACTAGGATCTGGGAGGAACATGACCTTGCATTGCCAGTCCAAAGATAATGATCTGGGCAAACAAAACATAGCATACGGGGACGAATTTGGATGGGACTTCTCTGACAATGTTGCTGGAACCACACTGTTTTTCTGTGATTTGGGATGGGAAAATGTTGAGGAGTTCCATTTTGATGCGTATTCCTTTGCCAGGGACAGGGTACGATGTGGTGATGCTGGATGTTCATGGCTAGTATCGATTGAAGGCATTTATGGCTTAAATGAACAAACGGGGTACTGGGAATTCATGTACCAATGGCCAAATTGA	417	0.4388	MGGLAKKITHHLVTLVLVIVLCTTIVEGTKHVSIKNRLGSGRNMTLHCQSKDNDLGKQNIAYGDEFGWDFSDNVAGTTLFFCDLGWENVEEFHFDAYSFARDRVRCGDAGCSWLVSIEGIYGLNEQTGYWEFMYQWPN*	139

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso13g0861	138	PANTHER	-	15	121	IPR010264	-
	Gso13g0861	138	Pfam	Plant self-incompatibility protein S1	31	136	IPR010264	-
	Gso13g0861	138	PANTHER	PUMILIO HOMOLOG 15-LIKE	15	121	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso13g0861	Gso-Chr13	22924148	22924603	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso13g0861	32	136	Carbohydrate Esterase	AT3G16970	35.185	2.54e-14	63.9

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso13g0861	-		-	gmx:102670225	278.1

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