Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0860 ATGGCGACGGGTAACAACGCGTCATGCCCAGCGTTCATGAAGGCAACGTCGAATGGGGCGTTCCAACATGAGAACCCCCTCGATTATGCGCTTCCTCTGTTAATCCTCCAGATTTGTTTGGTCGTTGTTTTTACTAGAGTTATTGCATTCCTCTGCAGACCCCTCAGACAACCCCGAGTCATTGCTGAGATCATTGGAGGAATACTACTTGGGCCATCTGCAATTGGACGAAATGAGAAGTTTCTGAGCACGGTTTTCCCAAAGAAAAGCATAACGGTTCTTGACACACTAGGCAACGTTGGTCTTTTGTTTTTCTTGTTTCTAGTTGGTCTTGAGCTTGACATGCGTGCTATTCGCCGTACTGGTCACAAGGCCTTAGCCATTGCCCTTTGTGGGATCACTGTGCCTTTTGTTCTTGGCATTGGCACTTCTTTTGCTCTTAGAGCCACCGTGTCCAAAGGTGCTGAGCCAGTTTCATTTCTTGTCTTCATGGGTGTTGCACTCTCAATCACTGCCTTTCCTGTCCTCGCTAGGATCCTAGCTGAGCTTAAACTCCTCACCACTGATGTTGGTCGCATAGCAATGTCAGCTGCAGCTGTGAATGATGTTGCAGCTTGGATTCTTCTTGCTCTTGCCATAGCCATTTCTGGTTCTAACGGATCACCCTTTGTTCCTCTTTGGGTCTTGCTCTCTGGTGTTGCTTTTGTTATCTTTGCTGTCTTTGCCATTAGGCCATTGCTTGTAGCTATGGCTAACCGTTCCCCTGAGGGTGAGCCAGTGAAGGAGGTGTACATATGCATCACATTGACACTGGTTTTGGCTTGTAGTTTTGTCACTGATACTATTGGAATCCATGCCCTCTTTGGGGCTTTTGTGATTGGTACCATTATGCCCAAAGAGGGTTCATTTTCTGTAGTGATGATTGAGAAGATAGAAGACCTGGTGTCTGGCCTTTTCCTGCCACTGTTTTTTGTGTCTAGTGGCTTGAAGACTAATGTGGCAACTATTAGTGGAGGACTTTCTTGGGCAATGTTGGTGCTTGTTATATTCAATGCTTGCTTTGGCAAGATTGTTGGCACAATAGTTGTGTCGTTAACGTGCAAGGTGCCTTCTCAAGAAGCCGTGGCACTTGGATTTCTCATGAACACAAAGGGCTTGGTAGAACTCATAGTTCTCAACATTGGGAAGGACCGTAAGGTGTTGAATGACCAAGCATTTGCCATTTGTGTTCTCATGGCATTGTTTACCACCTTCATCACCACCCCAATAGTGATGGCTGTATATAAACCAGCTCGCAGAGGAGCACCCTACAAGCACAGAACAATTCAGCGCAGAGATCCTGACACTGAGCTCCGAATGCTAGCTTGCTTCCACACCACCCGCAACATTCCCACGTTAATCAATCTCATAGAGTCTTCCCGCGGAATTCGAAAGAGAGGAAAGCTTTGCATCTATGCCATGCACTTGATGGAACTCTCAGAGCGATCTTCAGCAATCACAATGGTTCACAAGGCACGCAAGAATGGCATGCCCTTCTGGAACAAGAAACCGGATGACAAAGATCAAATGATCATTGCTTTTCAGGCTTATGAGAAACTAAGAAGTGTCAATGTGCGCCCCATGACAGCCATCTCTGCTCTCAATAGCATCCATGAGGATATTTGTACTAGTGCTCACCAAAAACGTGCAGCCATGATTATCCTCCCATTCCACAAACACCAACGTGTGGATGGATCAATGGAGTCACTAGGACATTCACTCCATGTGATGAATCAGCTTGTGCTAAGCCATGCTCCTTGCTCAGTGGGAATTTTGGTTGATCGAGGTCTTGGAGGGACAAGCCAAGTCCAAGCTAGTGATGTGTCTTATAAGGTTGTTGTACCCTTCTTTGGGGGACGTGATGATCGTGAAGCACTTTGTTATGGTATGAGAATGGCTGAGCACCCGGGGATTTTGCTCAATGTGGTTAAGTTTGTGCCCCCACCTGGGGCATCATTGGCCTTTGGTGCTAAATTGGTTGGGATGTCATCGAACAAGGACAAGAAAGCAATGGAAGTGGTTGGTGGCAGTTATTATGATGATAAACAACAAGATGATCAATTGTGGAGTGAGTTTTTAAGTGCATGCAACAACAACCAAGAGTCAATGAAGTATGAGCAAAAACTGGTGGCAAGCAAAGGTGATATTGAGGCAGCATTGAAGGAAATGAATAGGAGCAATCTAATATTGGTTGGTAGAATGCCATCAGTAGGACCTTTGGTTAGCAGAAGTGATTGTCCAGAACTTGGACCTGTTGGAAGCTACATGGCTTCTTCAGATTTCTCCACTGTTACATCAGTTATGGTAATTCAGCAATATAATCCTTCAACTGACATTCATCCACTAGTGATGGAGGAATTTGATTACCCAGATAAGCTAGAGCCAAACGCACCAAGGAGTTAA 2442 0.4558 MATGNNASCPAFMKATSNGAFQHENPLDYALPLLILQICLVVVFTRVIAFLCRPLRQPRVIAEIIGGILLGPSAIGRNEKFLSTVFPKKSITVLDTLGNVGLLFFLFLVGLELDMRAIRRTGHKALAIALCGITVPFVLGIGTSFALRATVSKGAEPVSFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIAISGSNGSPFVPLWVLLSGVAFVIFAVFAIRPLLVAMANRSPEGEPVKEVYICITLTLVLACSFVTDTIGIHALFGAFVIGTIMPKEGSFSVVMIEKIEDLVSGLFLPLFFVSSGLKTNVATISGGLSWAMLVLVIFNACFGKIVGTIVVSLTCKVPSQEAVALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHRTIQRRDPDTELRMLACFHTTRNIPTLINLIESSRGIRKRGKLCIYAMHLMELSERSSAITMVHKARKNGMPFWNKKPDDKDQMIIAFQAYEKLRSVNVRPMTAISALNSIHEDICTSAHQKRAAMIILPFHKHQRVDGSMESLGHSLHVMNQLVLSHAPCSVGILVDRGLGGTSQVQASDVSYKVVVPFFGGRDDREALCYGMRMAEHPGILLNVVKFVPPPGASLAFGAKLVGMSSNKDKKAMEVVGGSYYDDKQQDDQLWSEFLSACNNNQESMKYEQKLVASKGDIEAALKEMNRSNLILVGRMPSVGPLVSRSDCPELGPVGSYMASSDFSTVTSVMVIQQYNPSTDIHPLVMEEFDYPDKLEPNAPRS* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0860 813 Gene3D - 485 748 - -
Gso13g0860 813 PANTHER CATION/H+ EXCHANGER 3 6 800 - -
Gso13g0860 813 Pfam Sodium/hydrogen exchanger family 39 423 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso13g0860 813 PANTHER CATION/H + ANTIPORTER 6 800 - -
Gso13g0860 813 Gene3D - 33 435 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0860 Gso-Chr13 22909661 22913545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0860 1 802 Antiporter Super Family AT3G17630 68.493 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0860 - - gmx:100815966 1563.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0860 13 22909661 22913545 Gso17g0356 17 3227234 3231601 GST