Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0836 ATGATGGGTCACGTTGAAAGTGGAGCTACATGTTTGGTTGCACTTTCACTCGCACTCCACCTTGTATCAGCAACGACCACCTCTTCTTCCTTGGACGTTGGCGCCGTTAGAGTCGTGAGGGTTCGGAGGGACGGCGCGGGAGACTTTAGGACGGTGACGGACGCCGTTAACAGCATTCCGTCGGGGAACAAGCGGCGAGTGGTGGTGTGGATCGGAAGGGGCGTGTATCGCGAGAAGATCACCGTAGACAGGTCGAAACCTTTCGTTACGTTTTATGGAGAAAGGAATGGGAATGACAACGACAACGACAGCAGAGACATCATGCCCATCATAACGTACGACGCCACGGCGTTGCGGTATGGGACAGTGGACAGCGCCACCGTCGCTGTCGACGCCGACTACTTCGTGGCTGTCAATGTGGCATTTGTGAACTCGTCTCCTAGGCCAGAAGAAAACAGTGTTGGTGCACAAGCATTAGCCATGAGGATATCAGGGGACAAGGCTGCATTCTTCAACTGCAAGTTCATTGGATTTCAGGACACTTTATGCGATGATAAAGGCAGACACTTTTTCAAGGACTGCTACATCCAAGGCACCTACGATTTCATCTTTGGAAATGGAAAATCCATCTACTTGAGAAGTACCATAGAATCGGTGGCAAATGGTTTGAGTGTTATCACAGCACAAGGTAGGGAAAGCATGGCAGAAGACACTGGATTCACTTTCCTGCACTGCAACATAACGGGGAGTGGTAACGGGAACACTTACCTAGGGCGTGCCTGGAAGAAGAGCCCTAGGGTGGTATTTGCTTACACTTACATGGGCTCCCTCATCAATACCCAGGGATGGTTCAACAACCAAGTTGCTCATGCCAAATCCAACAACCAGACAATCTACTATGGAGAATATAGGTGCATGGGACCAGGAGCTGTTTCCTCTGGCCGCGTAAAATTTCGGAAGATACTGTCTAAGGAAGAAGCAAAGCCCTTCTTGAGCATGGCTTATATTCATGGAGGAACGTGGGTAGTTCCACCTCCCAAGCTGTGA 1047 0.5024 MMGHVESGATCLVALSLALHLVSATTTSSSLDVGAVRVVRVRRDGAGDFRTVTDAVNSIPSGNKRRVVVWIGRGVYREKITVDRSKPFVTFYGERNGNDNDNDSRDIMPIITYDATALRYGTVDSATVAVDADYFVAVNVAFVNSSPRPEENSVGAQALAMRISGDKAAFFNCKFIGFQDTLCDDKGRHFFKDCYIQGTYDFIFGNGKSIYLRSTIESVANGLSVITAQGRESMAEDTGFTFLHCNITGSGNGNTYLGRAWKKSPRVVFAYTYMGSLINTQGWFNNQVAHAKSNNQTIYYGEYRCMGPGAVSSGRVKFRKILSKEEAKPFLSMAYIHGGTWVVPPPKL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0836 348 Pfam Pectinesterase 40 338 IPR000070 GO:0030599|GO:0042545
Gso13g0836 348 SUPERFAMILY Pectin lyase-like 37 342 IPR011050 -
Gso13g0836 348 Gene3D - 37 345 IPR012334 -
Gso13g0836 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 28 347 - -
Gso13g0836 348 PANTHER PECTINESTERASE 28 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0836 Gso-Chr13 22649725 22652920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0836 35 348 Carbohydrate Esterase AT5G07410 49.682 3.79e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0836 K01051 - gmx:100790786 658.677