Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0800 ATGATGCGTTCCATTTCTTCCACAATTCACGCACCACAATTCCAGAGTTCGTTCTTCCGCATTTCTTCTCTGGCCATGACCATCGATACTGATTTCTTGACCAAGAAGAAGAAGCAAGTTTCGGTGCAACTTCCGAGTTTGACATCACCTGTCTCCACTGTGAGGTTCTGCGATCTCAATTTTGGCCGCTTGCAACCTTCGGATGACGAATTGGATCCTCACAATAGATTTGAGTTTGGCAATTTCGTTGCACGACAAGCCCTGCTTCACGAAGAGTATTGGACAGCAGCGTGGCTAAGGGCAGAAGAGTGGGCAAGTCGAACACATAAACTATATGTTGTTAATCACAAGAGGAATTTTGCTGATCAGGAATTTGATGCGATAAAAAAGCGGTGCAAGGAGCAACAAGACGGTCAGAGTAGCACATGCATCATCACGGTGAGGAAGCAGGACAAGAATGTAAAACGTTCAATAATAAGCAGTGTTGTAGGAACCCTTGATTTGAATATCCGATATTTGCGGCTAGGGGAGACCTTTCCTGGGGAACCGGTGGATGCTCCTCGTTTTTGTAAAATCGAACGAACACCATCAAGCAGATATGGTTATATTGCAAACTTGTGTGTTGCCAAATCAGTTCGTCGCAAGGGTATTGCCAGCAACATGTTGTATTTTGCTGTGGAGTCTGCAAAATCTAGTGGTGTGGCACATGTGTATGTGCATGTGGACAGAAACAATAAACCTGCCCAAATATTGTACCAAAACTTGGGGTTTGAGGTAGTTAACATGGCAAGCCCCCTGTTGTTGAAAAGTCAAACATACTTGCTTTGCTTACAGATGTAG 840 0.4429 MMRSISSTIHAPQFQSSFFRISSLAMTIDTDFLTKKKKQVSVQLPSLTSPVSTVRFCDLNFGRLQPSDDELDPHNRFEFGNFVARQALLHEEYWTAAWLRAEEWASRTHKLYVVNHKRNFADQEFDAIKKRCKEQQDGQSSTCIITVRKQDKNVKRSIISSVVGTLDLNIRYLRLGETFPGEPVDAPRFCKIERTPSSRYGYIANLCVAKSVRRKGIASNMLYFAVESAKSSGVAHVYVHVDRNNKPAQILYQNLGFEVVNMASPLLLKSQTYLLCLQM* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0800 279 Pfam Acetyltransferase (GNAT) family 147 257 IPR000182 GO:0016407
Gso13g0800 279 CDD NAT_SF 194 240 - -
Gso13g0800 279 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 192 261 IPR016181 -
Gso13g0800 279 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 25 279 - -
Gso13g0800 279 Gene3D - 85 269 - -
Gso13g0800 279 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 142 279 IPR000182 GO:0016407
Gso13g0800 279 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 25 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0800 Gso-Chr13 22320832 22322854 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso13g0800 Acetyltransf_1 2.6e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0800 - - gmx:100784591 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0800 13 22320832 22322854 Gso17g0411 17 3761612 3763758 GST
Gso13g0800 13 22320832 22322854 Gso15g1468 15 16923633 16933347 PCT
Gso13g0800 13 22320832 22322854 Gso9g0585 9 6945830 6949222 PCT
Gso15g1468 15 16923633 16933347 Gso13g0800 13 22320832 22322854 PCT
Gso9g0585 9 6945830 6949222 Gso13g0800 13 22320832 22322854 PCT