Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0785 ATGCTTACGTGCATAGCTCGTCCAAAGAAACCTGATGAGTCGGATCCAAACAACGCGACAAGCGCCGCTAAATCGCAAGCCGTCAAATCTCTCACTTCTCAGATAAGGGATATGGCGCTGAAGGCTTCGGGAGCGTACAAGCATTGCGCACCGTGCACGGGGCCAGCGACGCAGGGGCGATTTCGGAGCAACACCACCGAGTCGGACGCGGATTCGGACCGGTTCCGGTGGTCGTACCGGAGAACGGGGAGTTCGAGCTCGACGACGACAAGGACGTGGGGGAAGGAGATGGAGGCGCGGCTGAAGGGGATTTCGAGCGGGGAGGGGACGCCGAACTCCGCCAGCGGGAGGCGGGCGGAGCCGGTGGTGCTGTTTGTTGAAGAGAACGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTTTGATTACGTTCGTTTCGTTGCCACGTGGCGGGAACGATCTGAAGCGCATACGGTTCAGTCGAGAGATGTTCAATAAATGGCAAGCTCAAAGGTGGTGGGCAGAGAACTACGACAAGGTTATGGAACTTTACAATGTTCAAAGGTTTAACCGCCAAGCATTTCCTCTTCCAACGCCACCAAGATCTGAAGATGAGAGCTCAAAGCTTGAATCAGCTGAAGAAAGCCCCGTAACACCTCCACTGAACAGGGAACGGTTACCTCGTAATATGTACCGTCCAACAGGGATGGGAATGGGATACTCATCCTCAGATTCCTTTGATCATCAGTCAATGCAATCTCGGCATTTCTATGACTCAAATGGTATGAACTCAACACCGAAAGTGTCCACCATTAGTGCGGCCAAAACGGAGATATCATCAATGGATGCTTCTATCAGAAGTAGCTCATCGAGAGAGGCTGATCGCTCCGGTGATTTTTCAATCAGCAATGCTAGTGATTTGGAGACTGAATGGGTTGAACAGGATGAACCTGGGGTTTACATTACGATCAGAGCATTGCCAGGTGGTGCAAGAGAGCTCAAACGAGTCAGGTTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1101 0.5223 MLTCIARPKKPDESDPNNATSAAKSQAVKSLTSQIRDMALKASGAYKHCAPCTGPATQGRFRSNTTESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRAEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNRQAFPLPTPPRSEDESSKLESAEESPVTPPLNRERLPRNMYRPTGMGMGYSSSDSFDHQSMQSRHFYDSNGMNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDFSISNASDLETEWVEQDEPGVYITIRALPGGARELKRVRFSREKFGEMHARLWWEENRARIHEQYL* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0785 366 ProSiteProfiles BRX domain profile. 132 187 IPR013591 -
Gso13g0785 366 ProSiteProfiles BRX domain profile. 311 366 IPR013591 -
Gso13g0785 366 MobiDBLite consensus disorder prediction 195 249 - -
Gso13g0785 366 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 366 - -
Gso13g0785 366 MobiDBLite consensus disorder prediction 1 28 - -
Gso13g0785 366 Pfam Transcription factor BRX N-terminal domain 20 52 IPR027988 -
Gso13g0785 366 Pfam Transcription factor regulating root and shoot growth via Pin3 132 186 IPR013591 -
Gso13g0785 366 Pfam Transcription factor regulating root and shoot growth via Pin3 310 365 IPR013591 -
Gso13g0785 366 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 366 IPR044532 -
Gso13g0785 366 MobiDBLite consensus disorder prediction 47 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0785 Gso-Chr13 22187030 22192675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0785 1 366 Major Intrinsic Protein MIP AT1G31880 44.845 5.42e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0785 - - gmx:100794109 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0785 13 22187030 22192675 Gso17g0427 17 3883670 3889540 GST
Gso13g0785 13 22187030 22192675 Gso15g1429 15 15972246 15980143 PCT
Gso15g1429 15 15972246 15980143 Gso13g0785 13 22187030 22192675 PCT