Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0772 ATGGAGGAAATATCTTCTAGTGTTGCAGTACCTTTTACACTTGGTGTTGGAAATTTGATTCAAAAGGAGTCTGCAGTGACCACTCACATGGAGATAACTGGGCTGAAGCTTATGGCAAATACAGCAGCTGCTGCTTTGATGTTAAATCCGGCAGTGGAGTGTTTAAAGGAGAATCAAGTTGGAGCTGCTCTTGTTTCAGAAATGGTTATTGAATGTGAGAGTAATTGGGTCTTGAATGAAGGCCTTAACCAGGCAAGAAAGGAAGATGAATTAATGTTAGCGGTGGATTTTCAGTGTCTGCATAGTTCAAGCTCTCAATCTGTGGCTAATGGCAAAAGTGATCCTTGTAGGGAGGAAGCTGCGTTGTGGAAGAGTAGCTTTTCTGAAATAGATTCACCAATCATCATTAAGGTGGATGATGATGTTGATGGTAAGTCTGGAATAAGCAAGCTGTGTCCATCAACGAAGCTAGTGGAGGACACAGTTTGTTTTGCTATGGATATTACTAACGAGGATCAAAGTGGATCAGATGAGTCTGATCCTAGACCATCCGCTGTGCTTCTTGATCAGTTGCCAGGGGAGAATAAAACATGGAGAACAAGCAACCCGAATGCTTTGAAATTGAATAGTGGCCCTCTCTGGGGTTGTTCATCAATTTGTGGAATGAGACAGGAGATGGAAGATGCTATTTCTGTTAGACCTCAACTTTTTCAAGTTTCTTCACAGATGTTGATTAATGACCATGTGAATGAGAATGGAAAACAGTCACTAGCCCACTTTTTTGCTGTCTACGATGGACATGGGGGCCTTCAGGTTGCCAATTACTGCCAGGAACGTCTTCATTCAACGTTGATTGAGGAGATAGAGACTGCACAATCAAGTTCGGCTGAAACAAATGGGAGAGATGATTGGCAGGACCAATGGAAGAAAGCATTCATCAATTGTTTTCAGAAAATGGATGATGAGGTTGGAGGAATTGGTGCAAGTAACAAAGGAAACAACAGTGGTGGGTCTGAGTCTAATATTGAAACTGTTGCTCCTGAGACTGCTGGCTCCACTGCAGCGGTTGCCATTTTAAGCCAAACCCACATCATAGTTGCAAATTGTGGAGATTCAAGAACTGTCTTATACCGTGGAAAAGAAGCCATGCCATTGTCTTCTGACCACAAACCAAATAGAGAGGATGAGCGGGCTCGGATAGAAGCTGCGGGAGGAAGAGTCATACATTGGAAAGGATATCGAGTTCTTGGTGTCTTGGCGATGTCAAGGTCCATAGGTGATAGATACCTGAAACCATGGATAATTCCAGAACCTGAAGTCAATATTGTGCGTCGAGAAAAAAATGATCAGTGTCTAATTCTAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCATGCGAGGTTGCAAAGAAGCGAATCCTTCTTTGGCACAAGAAGTATGGTGACAACGGCACAACAGGACGCAGTGAAGGAGCGGATCCTGCAGCTCAGTCAGCTGCAGAGTATCTAACTAAGCTTGCCATCCACAGGGGAAGCCAAGATAACATCTCTGTAATTGTGATAGACTTAAAGGCTCAAAGAAAAATTAAGAGAAAGCCATAA 1611 0.4295 MEEISSSVAVPFTLGVGNLIQKESAVTTHMEITGLKLMANTAAAALMLNPAVECLKENQVGAALVSEMVIECESNWVLNEGLNQARKEDELMLAVDFQCLHSSSSQSVANGKSDPCREEAALWKSSFSEIDSPIIIKVDDDVDGKSGISKLCPSTKLVEDTVCFAMDITNEDQSGSDESDPRPSAVLLDQLPGENKTWRTSNPNALKLNSGPLWGCSSICGMRQEMEDAISVRPQLFQVSSQMLINDHVNENGKQSLAHFFAVYDGHGGLQVANYCQERLHSTLIEEIETAQSSSAETNGRDDWQDQWKKAFINCFQKMDDEVGGIGASNKGNNSGGSESNIETVAPETAGSTAAVAILSQTHIIVANCGDSRTVLYRGKEAMPLSSDHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVRREKNDQCLILASDGLWDVMTNEEACEVAKKRILLWHKKYGDNGTTGRSEGADPAAQSAAEYLTKLAIHRGSQDNISVIVIDLKAQRKIKRKP* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0772 536 CDD PP2Cc 215 526 IPR001932 -
Gso13g0772 536 PANTHER ALPHABET, ISOFORM E-RELATED 83 536 - -
Gso13g0772 536 Pfam Protein phosphatase 2C 236 519 IPR001932 -
Gso13g0772 536 Gene3D - 202 536 IPR036457 -
Gso13g0772 536 ProSiteProfiles PPM-type phosphatase domain profile. 213 526 IPR001932 -
Gso13g0772 536 SUPERFAMILY PP2C-like 210 527 IPR036457 -
Gso13g0772 536 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 83 536 - -
Gso13g0772 536 ProSitePatterns PPM-type phosphatase domain signature. 260 268 IPR000222 GO:0043169
Gso13g0772 536 SMART PP2C_4 203 524 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0772 Gso-Chr13 22059903 22063481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0772 199 536 PP2C-type Phosphatase Gene Family AT4G26080 58.430 8.05e-135 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0772 K14497 - gmx:100789207 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0772 13 22059903 22063481 Gso17g0439 17 3977681 3981155 GST
Gso13g0772 13 22059903 22063481 Gso15g1422 15 15834850 15838949 PCT
Gso13g0772 13 22059903 22063481 Gso9g0561 9 6425260 6429418 PCT
Gso15g1422 15 15834850 15838949 Gso13g0772 13 22059903 22063481 PCT
Gso9g0561 9 6425260 6429418 Gso13g0772 13 22059903 22063481 PCT