Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0739 ATGGGGAATTGTTGGAGTCATCAATCAGGTTCTCCAGGCGATCACCGCAACTCCAATACTGCCCCCAACCCCAACAATCAATCAGGGAGTATTCAGTTTTCTGCTGGTCTCAGCAACACAAGATTAATACAGAATGGCAATTCTACTTCTCTTGGGCGTAGCAGCCACTCTGGAGGAATCAGCAGGTTCTTTGGGCCAAGTAGTAGTAATAACTACTCAACAGGAAATAATACTAGCACATCCCTTTGGGGCTCTGAGACTAGCCAAGCCTCTCGAGTGAGAGATGAAGAGGAGTTTCCTCATGGGCAGATCTTGGATGTTGCAGACTTGAGAGCATTTACACTGGCCGAATTGAAGGCAGCCACCAAAAATTTCAGAGCTGAGACTGTGCTAGGAAAGGGGGGCTTTGGTACAGTATTCAAGGGCTTGATTGAGGATAGAGCAGCAAAGAAAAGAGGAGAGGGGTTGACTATTGCCATCAAGAAATTGAATTCTGGAAGCAGCCAAGGAATTGCAGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCACCCCAATCTTGTTAAGTTGTTGGGATTTGGGCGAGAGAATAGTGAACTTTTCCTGGTGTATGAATTTATGCATCGTGGCAGCTTGGATAACCACCTATTTGGAAGAGGAGCAAATGTTCGGCCACTTTCTTGGGACACAAGGCTAAAGGTTATGATTGGAGCAGCAAGGGGACTGAATTTCCTACACTCCTTGGAGGAAAAAATTATATATAGAGATTTTAAACCCTCAAATATATTACTTGACACGGTTGTGGGAACGCATGGCTATGCTGCTCCCGAGTACATTTTTACTGGTCATTTGTACGTAAAAAGTGACGTGTATGGATTTGGAATTGTTTTGTTGGAGGTGCTGACTGGCAAGAGGATCAGTGGTATAATGTTCCTGTGTGAGCAAACGTCCTTGAGTGATTGGCTCAAATCAAATCTTCTAAATAGAGGGAAAATAAGAAGCACTATGGATGCAAAGTTGGAAGGTAAGTATCCATCCAACTTAGCTTTACAGTTAGCTCAACTTGCTCTTAAATGCATCCAAGCAGAGCCCAAAGTCAGGCCATCAATGAAAGAAGTTGTTGAAACATTGGAACATATTGAAGCAGCTAATGAGAAACCAGCTGATAACACTCATAACAGAAAACGGGTTAATCTTTCCCGGGTAGTTCAACAACATGGCCGGCCAGAAGGTGGTTAA 1245 0.4378 MGNCWSHQSGSPGDHRNSNTAPNPNNQSGSIQFSAGLSNTRLIQNGNSTSLGRSSHSGGISRFFGPSSSNNYSTGNNTSTSLWGSETSQASRVRDEEEFPHGQILDVADLRAFTLAELKAATKNFRAETVLGKGGFGTVFKGLIEDRAAKKRGEGLTIAIKKLNSGSSQGIAEWQSEVNFLGRLSHPNLVKLLGFGRENSELFLVYEFMHRGSLDNHLFGRGANVRPLSWDTRLKVMIGAARGLNFLHSLEEKIIYRDFKPSNILLDTVVGTHGYAAPEYIFTGHLYVKSDVYGFGIVLLEVLTGKRISGIMFLCEQTSLSDWLKSNLLNRGKIRSTMDAKLEGKYPSNLALQLAQLALKCIQAEPKVRPSMKEVVETLEHIEAANEKPADNTHNRKRVNLSRVVQQHGRPEGG* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0739 414 MobiDBLite consensus disorder prediction 1 32 - -
Gso13g0739 414 MobiDBLite consensus disorder prediction 65 89 - -
Gso13g0739 414 PANTHER OS01G0588500 PROTEIN-RELATED 12 268 - -
Gso13g0739 414 PANTHER OS01G0588500 PROTEIN-RELATED 269 414 - -
Gso13g0739 414 ProSiteProfiles Protein kinase domain profile. 125 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0739 414 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 12 268 - -
Gso13g0739 414 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 269 414 - -
Gso13g0739 414 Gene3D Phosphorylase Kinase; domain 1 85 208 - -
Gso13g0739 414 Gene3D Transferase(Phosphotransferase) domain 1 209 268 - -
Gso13g0739 414 Pfam Protein kinase domain 127 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso13g0739 414 ProSitePatterns Protein kinases ATP-binding region signature. 131 162 IPR017441 GO:0005524
Gso13g0739 414 Gene3D Transferase(Phosphotransferase) domain 1 269 408 - -
Gso13g0739 414 SUPERFAMILY Protein kinase-like (PK-like) 110 385 IPR011009 -
Gso13g0739 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Gso13g0739 414 MobiDBLite consensus disorder prediction 65 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0739 Gso-Chr13 21690305 21693400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0739 102 400 Receptor kinase-like Gene Family AT4G02010 39.697 5.08e-71 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso13g0739 Pkinase 4.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0739 - - gmx:100813304 800.816