Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0720 ATGAGATTGTTGGAGTTTGGGTGTGTGTTGATTGTTCTATCTGCATTTCTGGGTTGTGGGGATGCCGAGGTTTACATAGTAACTGTTGAAGGTGAGCCTATCATAAGTTATACTGGAGGTATTGATGGGTTTGAAGCTACTGCTGTGGAATCCGATGAGGAGATTGATACCGCAAGTGAATTGGTTTCTTCTTATGCTCGCCATCTTGAGAAAAAACATGACATGCTGCTGGGGTTGCTGTTTGAGGAAGGGACATACCAGAAACTCTATAGCTATCGACATCTTATTAATGGGTTTGCTGTTCATATTTCACCAGAACAGGCAGAAACTCTAAGACATGCTCCTGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAGGAGACTTACAACACATACCCCACAATTTTTAGGGCTTCCAACTGGGGTTTGGCCAACAGGAGGTGGCTTTGATCGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCAGGGATCTATCCTCATCACCCAAGTTTTGCAGCTCATAATGCTGAGCCATATGGGCCAGTTCCAAAGTATAGAGGAAAATGTGAAGCTGATCCAGATACTAAAAGAAGTTACTGTAATGGGAAGATTGTTGGAGCACAACACTTTGCTCATGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTGACTTTGCATCTCCTCTCGATGGGGATGGACATGGAAGTCATACAGCCTCTATTGCGGCTGGAAATAATGGAATTCCTGTGAGAATGCATGGCCACGAATTTGGGAGAGCGAGTGGGATGGCTCCTCGTGCTAGGATTGCTGTGTACAAGGCACTCTATAGACTGTTTGGAGGGTTTGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTGTATGATGGAGTGGATATACTCAGCCTTTCAGTTGGACCCAACAGTCCTCCAGCAGCTACCAAGACTACGTTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCCGTGAAAGCTGGTGTCTTTGTTGCACAGGCTGCAGGAAATGGTGGTCCTTTTCCTAAGACATTGGTTTCATATAGTCCATGGATAGCATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAATCATTTGATCCTTGGAAATGGAAAAACCTTAGCTGGAATTGGGTTATCACCTTCCACGCATTTAAACGAAACATACACATTGGTTGCCGCAAATGATGTGTTGCTAGATTCTTCAGTTATGAAGTATAGCCCCACGGATTGCCAGAGACCTGAACTTTTAAACAAGAACTTGATAAAGGGTAATATTCTTCTTTGTGGATATTCCTTCAACTTTGTTGTTGGCTCTGCATCAATCAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGTGCAGTTGGATTTGTTCTTTGTGTTGAAAACAATTCCCCAGGAACAAAATTTGATCCAGTCCCTGTTGGTCTTCCTGGGATTCTCATCACAGATGTCAGCAATTCTAAGGAACTTATAGATTATTATAATATCACTACACCAAGAGACTGGACTGGGCGGGTAAAGAGTTTCGAAGGTAAAGGTAAAATCGGTGATGGTTTGATGCCTATTCTGCATAAATCTGCCCCACAGGTAGCATTATTCTCTGCTCGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTGTCCAAATGGAACTGATGAGCCAAATTATGTTGGTGAGGGGTTTGCCATGATATCTGGAACTAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTCATAAAGCAGAAGCATCCTCATTGGAGCCCTGCGGCCATTAAATCAGCTTTGATGACAACATCAACAACTCTAGACAGAGCAGGGAATCCTCTTCTAGCCCAGCAAACTTCTGAATCAGAAGCTATGAGGCTGGTCAAAGCTACTCCTTTTGATTATGGGAGTGGACATGTTGATCCAACAGCTGCATTGGACCCTGGGCTCATCTTCGATGCAGGATACAAGGATTATGTAGGCTTCTTGTGCACAACACCCAGCATTGATGTTCATGAGATAAGGCACTACACTCATACACCATGTAACACCACCATGGGAAAACCATCAAATTTAAACACCCCATCAATCACAATTTCCTATCTTGTGAGAACTCAAGTTGTCACGCGCACTGTCACAAATGTTGCCGAGGAGGAAACCTATGTGATCACAGCCAGAATGGAACCTGCTGTTGCCATTGAAGTCAACCCTCCAGCAATGACTATCAAAGCGGGCGCATCGCGTCAGTTTTCGGTGTCACTTACAGTGCGCTCAGTGACAAGAAGGTATAGTTTTGGAGAGGTTTTGATGAAAGGGAGCAGAGGGCACAAGGTGAGGATTCCTGTTCTGGCCAATGGACACAGACGATAG 2454 0.4446 MRLLEFGCVLIVLSAFLGCGDAEVYIVTVEGEPIISYTGGIDGFEATAVESDEEIDTASELVSSYARHLEKKHDMLLGLLFEEGTYQKLYSYRHLINGFAVHISPEQAETLRHAPGVKSVERDWKVRRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFAAHNAEPYGPVPKYRGKCEADPDTKRSYCNGKIVGAQHFAHAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVYDGVDILSLSVGPNSPPAATKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLILGNGKTLAGIGLSPSTHLNETYTLVAANDVLLDSSVMKYSPTDCQRPELLNKNLIKGNILLCGYSFNFVVGSASIKKVSETAKALGAVGFVLCVENNSPGTKFDPVPVGLPGILITDVSNSKELIDYYNITTPRDWTGRVKSFEGKGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPLLAQQTSESEAMRLVKATPFDYGSGHVDPTAALDPGLIFDAGYKDYVGFLCTTPSIDVHEIRHYTHTPCNTTMGKPSNLNTPSITISYLVRTQVVTRTVTNVAEEETYVITARMEPAVAIEVNPPAMTIKAGASRQFSVSLTVRSVTRRYSFGEVLMKGSRGHKVRIPVLANGHRR* 818
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0720 817 PANTHER CUCUMISIN-RELATED 14 815 - -
Gso13g0720 817 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Gso13g0720 817 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Gso13g0720 817 PRINTS Subtilisin serine protease family (S8) signature 596 612 IPR015500 -
Gso13g0720 817 SUPERFAMILY Subtilisin-like 129 678 IPR036852 GO:0004252|GO:0006508
Gso13g0720 817 CDD PA_subtilisin_like 376 514 - -
Gso13g0720 817 ProSitePatterns Serine proteases, subtilase family, serine active site. 597 607 IPR023828 -
Gso13g0720 817 SUPERFAMILY Protease propeptides/inhibitors 86 127 - -
Gso13g0720 817 Gene3D - 369 534 - -
Gso13g0720 817 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 159 170 IPR023827 -
Gso13g0720 817 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gso13g0720 817 Pfam Peptidase inhibitor I9 24 127 IPR010259 -
Gso13g0720 817 Gene3D Peptidase S8/S53 domain 156 687 IPR036852 GO:0004252|GO:0006508
Gso13g0720 817 CDD Peptidases_S8_3 130 633 IPR034197 -
Gso13g0720 817 ProSiteProfiles Serine proteases, subtilase domain profile. 123 674 - -
Gso13g0720 817 Pfam Subtilase family 154 638 IPR000209 GO:0006508|GO:0008236
Gso13g0720 817 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 815 IPR045051 -
Gso13g0720 817 Gene3D - 691 814 - -
Gso13g0720 817 Pfam Fibronectin type-III domain 719 811 IPR041469 -
Gso13g0720 817 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 128 IPR037045 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso13g0720 Gso-Chr13 21480726 21487817 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0720 4 817 Subtilisin-like Serine Gene Family AT4G30020 80.416 0.0 1356
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0720 13 21480726 21487817 Gso17g0500 17 4545956 4553779 GST
Gso13g0720 13 21480726 21487817 Gso15g1357 15 14357764 14364076 PCT
Gso13g0720 13 21480726 21487817 Gso9g0499 9 5351549 5358234 PCT
Gso15g1357 15 14357764 14364076 Gso13g0720 13 21480726 21487817 PCT
Gso9g0499 9 5351549 5358234 Gso13g0720 13 21480726 21487817 PCT