Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0707 ATGGGAGGGCAAGTAGTTAAACGCAGACGTGTATACTCCGTGGAATCAAACCAAATAGTGCAACCTATATTTACTAGGAATTATTTGAACCATTTGGTTCCAGCGTTGGTGAAGATAAAGGAAAAGGGTTCTATAAAAGAAGATAGCAGCAGCCATTGTAATGATAATATTAACAATGCTGTCAAGTATGAAGTGGACATGGCAATGGTATTGTCAGCACAAGGTTTTGCATGGAGTAACGGCCTTAAAGTCAAGCTTCAAAGCGATGACGTTCATGTCAATGCAGCTAAAAGCACTAGGTTTCTTGAAAATAAGGCTAGTGAAGGTTCATCGAAGAATAATGTTTATGACAAAAATGAAGTTGTCCCAATGGAATATTTCTCTTCAAACCCTAGCTCAAGGTCTAAGTGCAAGGACATGTCAGAAATGAAAAGGGATCTAGCCAGAGAAGATGATAAGGAAGCTGAGGACATCAACAACCAGTGGAAGAGGCTGAGAAGGATGATACCTGGAGGAGAAGAGATGTGTGATGATGAACAAATGGTTTCAGAGCTTGAGAGTTACATAAACTGTTTGCAAATGCAGGTGAACGCTCTTCAGTTTCTACTGCCACACACGCGCTGA 624 0.4071 MGGQVVKRRRVYSVESNQIVQPIFTRNYLNHLVPALVKIKEKGSIKEDSSSHCNDNINNAVKYEVDMAMVLSAQGFAWSNGLKVKLQSDDVHVNAAKSTRFLENKASEGSSKNNVYDKNEVVPMEYFSSNPSSRSKCKDMSEMKRDLAREDDKEAEDINNQWKRLRRMIPGGEEMCDDEQMVSELESYINCLQMQVNALQFLLPHTR* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0707 207 CDD bHLH_AtIBH1_like 149 203 IPR044549 GO:0006355
Gso13g0707 207 PANTHER TRANSCRIPTION FACTOR BHLH146 4 206 - -
Gso13g0707 207 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 4 206 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0707 Gso-Chr13 21284792 21286246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0707 1 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 32.353 6.98e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0707 - - gmx:100775329 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0707 13 21284792 21286246 Gso17g0517 17 4715179 4716683 GST
Gso13g0707 13 21284792 21286246 Gso15g1336 15 14017735 14018855 PCT
Gso13g0707 13 21284792 21286246 Gso9g0478 9 5040154 5041452 PCT
Gso15g1336 15 14017735 14018855 Gso13g0707 13 21284792 21286246 PCT
Gso9g0478 9 5040154 5041452 Gso13g0707 13 21284792 21286246 PCT