Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0689 ATGAATGAATACTGGACCTCGTTGGCGTCACTTCTTGGTGTGTTTGCCTTCTGCCAAACCATCCTCCAAGCAGTGTTCCCACCGGAGCTCCGCTTCGCTTCCGTGAAGCTCTTCTACCGTATCTTCCACTGCTTCTCCTCCTACTGCTACTTCGACATCACGGAGATCGACGGCGTCAACACCAACGAGCTCTACAACGCCGTCCAGCTCTACCTGAGCTCCTCCGTCTCCATCACCGGTAACCGCCTCAGCCTCACACGCGCCGTCAACTCCTCGGGCTTCACCTTCGGGCTGGCCAACAATGACAGCATCGTCGACACCTTCAATGGCGTGAACGTGCTGTGGGAGCACGTGGTGACGCAGCGGCAGGCCCAGACCTTCTCGTGGCGCCCACTCCCCGACGAGAAGCGTGGCTTCACGCTCCGGATCAAGAAGAAGGACAAGTCCTTCATCCTAAACTCCTACCTGGATTACATTATGGAGAGAGCCAGCGACATTCGGAGGAACAATCAGGATCGGCTCCTCTACACGAATTCCAGGGGTGGCTCCCTGGACTCCCGGGGCCACCCTTGGGAATCTGTGCCCTTCAAGCACCCCAGCACCTTTGACACATTGGCTATGGACCCTCACAAGAAGAAAGAGATCATGGAGGATCTTCTGGACTTCGCCAATGGACAATCTTTTTACCATAAAACCGGTAGGGCTTGGAAGAGAGGCTACCTTCTATATGGCCCTCCAGGTACTGGCAAGTCAAGCATGATCGCCGCCATGGCCAATTTTCTCGGTTATGATATTTACGATCTTGAGCTCACTGAGGTGCATAACAACTCTGAACTCAGGAAGCTTCTCATGAAAACCAGCTCCAAGTCGATAATAGTCATTGAAGATATTGATTGCTCCATCAACCTCACCGGTAGAAAGAACAATAACGGTTCTGTTTCTGTTTCTGCTTCGAGGAGTTACTATGATTCCGAGATACGAGCAGGTGGTGGTTGTGGTGAGGAGGGTGGGAATAATATTACTCTGTCTGGGTTGCTGAATTTTACTGATGGCTTGTGGTCTTGTTGTGGAAGTGAGAGGATTTTTGTGTTTACCACCAACCACATTGAGAAGCTTGACCCGGCTCTGCTGCGGAGTGGGAGAATGGATATGCATATTTTCATGAGTTACTGTTCGTTCCCGGCGCTGAAGATTCTGCTGAAGAATTACTTGGGGTGTGAAGCGTGTGAGCTTGAGGAGTCGATTTTGAAGCAGCTGGAGGAGGTTGTCGACGTGGCGCGGATGACTCCGGCCGATATCAGCGAGGTCTTGATCAAGAACAGGCGCAAGAAGGAGAAGGCGGTGGAGGAGTTGTTGGAGACGTTGAAGCTGAGAGCGGAGATGAATGAGAAGAGTGGTGTTTTGAGGGGGAAAAATGTGGTTGAAGAGGAGGAAGAAGAGGAAGAGCAAGAGAAGAGGGCTTTGGACAGTGAGAGTCCTAAGCAGGAGTCAGAGATTGAGGACAATTGCAAGGAGGAGGAGGAGGAGGAAGAAGAGAAGATCAAGTGA 1548 0.5168 MNEYWTSLASLLGVFAFCQTILQAVFPPELRFASVKLFYRIFHCFSSYCYFDITEIDGVNTNELYNAVQLYLSSSVSITGNRLSLTRAVNSSGFTFGLANNDSIVDTFNGVNVLWEHVVTQRQAQTFSWRPLPDEKRGFTLRIKKKDKSFILNSYLDYIMERASDIRRNNQDRLLYTNSRGGSLDSRGHPWESVPFKHPSTFDTLAMDPHKKKEIMEDLLDFANGQSFYHKTGRAWKRGYLLYGPPGTGKSSMIAAMANFLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSINLTGRKNNNGSVSVSASRSYYDSEIRAGGGCGEEGGNNITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSFPALKILLKNYLGCEACELEESILKQLEEVVDVARMTPADISEVLIKNRRKKEKAVEELLETLKLRAEMNEKSGVLRGKNVVEEEEEEEEQEKRALDSESPKQESEIEDNCKEEEEEEEEKIK* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0689 515 Gene3D - 192 390 IPR027417 -
Gso13g0689 515 MobiDBLite consensus disorder prediction 468 515 - -
Gso13g0689 515 CDD AAA 237 390 - -
Gso13g0689 515 MobiDBLite consensus disorder prediction 486 500 - -
Gso13g0689 515 PANTHER BCS1 AAA-TYPE ATPASE 2 506 - -
Gso13g0689 515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 453 IPR027417 -
Gso13g0689 515 Pfam ATPase family associated with various cellular activities (AAA) 241 389 IPR003959 GO:0005524|GO:0016887
Gso13g0689 515 MobiDBLite consensus disorder prediction 501 515 - -
Gso13g0689 515 SMART AAA_5 236 392 IPR003593 -
Gso13g0689 515 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
Gso13g0689 515 Coils Coil 471 491 - -
Gso13g0689 515 PANTHER BNAC03G12930D PROTEIN 2 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0689 Gso-Chr13 21072468 21074803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0689 184 456 Miscellaneous Gene Families AT3G02450 25.685 3.59e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0689 - - gmx:100813109 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0689 13 21072468 21074803 Gso17g0535 17 4927005 4929033 GST