Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0675 ATGAATAAACCAACAAGCGACGCAATTAATATGGGGAAAAGGAGCCTGGAGGGTGGAGAAGATGATCAGCCCGAACGAAAGAGGCCTGCTCTTGCCAGTGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCCATTCTTCGTAGAGTTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCAAAGTTAGGTCCTGCAAGACTTAGTGGAAGGTCTCCTCCTAAAATGATTGAAGGCCCTGATGGTAGAAGCTTACAGCTGAAATTTAGGTCCCGGCTGTCTCTTCCCCTATTCACAGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCAATACATGTTGTTCTGATGGATGTCAATAGTGGAAGCGTTGTAACATCTGGACCTGAATCCTGTGTTAAACTTGATGTTGTTGTCCTTGAAGGCGATTTTAACAATGAAGATGATGAAGATTGGACTCAGGAGGATTTTGAAAGCCATGTGGTAAAAGAACGTGAAGGAAAGAGACCTTTGTTAACTGGGGACCTGCAAGTGACACTCAAGGAAGGAGTTGGGACATTAGGGGAACTGACGTTTACAGATAATTCCAGCTGGATAAGGAGTCGGAAATTCAGGCTTGGCTTGAAGGTTGCATCAGGTTTTTGCGAGTCCTTACGCATTCGTGAAGCTAAGACAGTGGCTTTCACAGTTAAAGATCATAGAGGAGAACTATATAAGAAGCATTATCCACCAGCATTGACTGATGAAGTGTGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTCCATAAGAAGCTGAATAATGCAGGAATAGTCACAGTTGAAGAATTTCTTCGGCTTGTGGTTAAAGATCAACAAAAATTGCGGAATATCCTTGGGAGTGGTATGTCAAACAAGATGTGGGAGGCTCTTTTAGACCATGCAAAAACATGTGTTCTAAGTGGGAAGCTCTATGTTTATTATCCAGAAGATGCAAGAAATGTTGGCATTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATATCAGGAGACCAATTCTATTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTTATGTAGATTCATTGGTGAAGAAAGCATATGAAAATTGGGATCAGGTTGTGGATTATGATGGCAAATCACTCGTGAATGCTAAAATTGCTTCTGAAAATGAACTTCGGGTGGAGTCAATTGATTATGGTAGTGGTTTAGATCATCAACTGCAACTGCCGGCACTTCCCGTGTCTGTTCCTTCTGAGCAGCAAATCAATTCAGGGATGCCTGTTGGAGGTTATAATGATAATAATATAGTAATACGATATCCAACCCAGTCATTGATTCCAAACTCCAGCTCCCGGACTCAGTTCGATAGCTCATTATATGTGTCTAATGACCAATTAATTAGCAATGCTCACCAAACCCAAAGCACTAGTAATGATCGTGGCCCAATTGGGTTAGCTCTTGGTCCTCCTCAATCATCGACATCAGGGTTCCATGCTGGTAGCTCTTCTATTCAGCCATCTACTATAAATCCTTTTGATGATTGGTCACACAACAGGGACAAGGGGGCTGATGAATTCTTTTCGGAAGAAGAAATCCGCTTCAGAAGTCATGAGATGCTAGAGAATGAAGATATGCAGCAGTTGCTTCGCCTCTTCAGCATGGGAGGTAATGGCTCCATGAGTGCTGAGGATGGCTATTCATTCCCATCATTCATGCCATCTCCCAGTATACCAAACTATGATGAGGATCGCTCTCGCCCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGATAGCAGCTGAGAGGCGGGCACAGATAGAGGAGTTAGATGAATAG 1896 0.4388 MNKPTSDAINMGKRSLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLSGRSPPKMIEGPDGRSLQLKFRSRLSLPLFTGGKVEGEQGAPIHVVLMDVNSGSVVTSGPESCVKLDVVVLEGDFNNEDDEDWTQEDFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESLRIREAKTVAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKKLNNAGIVTVEEFLRLVVKDQQKLRNILGSGMSNKMWEALLDHAKTCVLSGKLYVYYPEDARNVGIIFNNIYELRGLISGDQFYSADSLTDSQKVYVDSLVKKAYENWDQVVDYDGKSLVNAKIASENELRVESIDYGSGLDHQLQLPALPVSVPSEQQINSGMPVGGYNDNNIVIRYPTQSLIPNSSSRTQFDSSLYVSNDQLISNAHQTQSTSNDRGPIGLALGPPQSSTSGFHAGSSSIQPSTINPFDDWSHNRDKGADEFFSEEEIRFRSHEMLENEDMQQLLRLFSMGGNGSMSAEDGYSFPSFMPSPSIPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAERRAQIEELDE* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0675 631 Pfam Calmodulin binding protein central domain 252 317 IPR046830 -
Gso13g0675 631 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
Gso13g0675 631 MobiDBLite consensus disorder prediction 496 511 - -
Gso13g0675 631 Pfam Calmodulin binding protein C-terminal domain 322 384 IPR046829 -
Gso13g0675 631 MobiDBLite consensus disorder prediction 1 28 - -
Gso13g0675 631 PANTHER OS02G0177800 PROTEIN 8 630 IPR012416 GO:0005516
Gso13g0675 631 MobiDBLite consensus disorder prediction 14 28 - -
Gso13g0675 631 MobiDBLite consensus disorder prediction 479 511 - -
Gso13g0675 631 PANTHER CALMODULIN-BINDING PROTEIN 60 B 8 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0675 Gso-Chr13 20962613 20968978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0675 9 626 Calmodulin-binding Proteins AT5G57580 68.571 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0675 - - gmx:100790087 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0675 13 20962613 20968978 Gso17g0551 17 5062049 5068140 GST