Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0655 ATGCTATCAAGATCTTGCTTGGGGCTATTGAATTTGGTATCGGTGGATGATTACCAAACGCTGGGTGGTCGCGTTCCGCGGCTGGTGACGACGGCGGCCGGAGACGTGCCGGAGTTGTATATCGACGGCATGGAGAATCCGGGATCGGACGACGCCGTTTCGCCGGCGCGGCGCGAGCGGAGGATCGTGGTCGCGAATCAGTTACCGATACGCGCGTTTCGCGAGGGGAGGAAATGGAGGTTCGAGTGGGACAGAGACAGCCTCGTCCTTCAGCTCAAAGACGGATTTCCTTCCGACGTGGAAGTGTTGTACGTCGGTTCCCTGAAAGCAGAGATCGAAGGCTGCAAACAAGAAGAAGTCGCTCAGTTACTCCTCGAAAAGTTCCGCTGCGTCCCAACGTTTATACCTTCAGAAATTCACAACAAATTCTACCATGGTTTTTGCAAGCATTACCTGTGGCCACTTTTTCACTACATGCTACCCATGTCGCCGAGCCAAGGCGCGCGTTTCGACCGCGAGCAGTGGAAGGCGTATGTGCTCGCGAACAGGATCTTCGCAGAAAAGGTCACCGAGATTATCAACCCGGACGAGGATTATGTCTGGGTTCACGATTACCACCTCATGATACTACCCACGTTCCTCCGGAAGCGGTTCCACCGTGTGAAGCTGGGCTTCTTCTTGCACAACACGTTTCCGTCGTCGGAGATATACCGGACTCTACCCGTTCGCGAGGACATCCTCCGCGCGTTTCTGAACTGCGACCTGATCGGGTTCCACACCTTCGACTACGCGCGACATTTTTTGTCGTGTTGTAGCAGGATGCTGGGGCTGGATTACGAGTCCAAGAGGGGTTACATTGGGTTGGATTACTACGGTCGCACCGTGACGGTTAAGATCCTCCCCGCGGGGATTCACATGGGGCTCTTGGAGTCGGTGTTGTCTTTGCCGCAGACGGCGTTAAGGGTGAAGGAATTGAAGAAGGAGTATGAAGGAAAGGTTGTGATATTGGGAGTGGATGACATGGACTTGTTCAAAGGTATTAGTTTAAAGTTCTTAGCTTTGGGGAAGCTTCTGGAAGTGGATGAAAGCTTAAGGGGTCGTGTGGTGTTGGTTCAGATTCTGAACGCGGCGAGGAGCAGAGGGAAGGACATTCAGGACGTGAAGAACGAGAGCGAGGCCATTGCCAGAGAGATCAATGAGAAATATTCACAACCGGGGTACCAGCCTATTGTTTACATCAATGGACCAATCTCCACGCAGGAGAAGGCTGCGTATTACGCTGTTTCTGAGTGCTGCGTTGTGAATGCGGTGAGGGATGGGATGAATTTGGTGCCTTATGAGTACACTGTTTGCAGGCAGGGGAGTTTTGCTTTGGACAAGGCGCTTGGCGTTGAAGGTGAGGATAAGAAAACCCTTAAGCAGAGCGTTATCATCGTGTCTGAGTTCATAGGGTGTTCCCCTTCGCTCAGTGGAGCCATCAGGGTGAATCCGTGGAACATTGATGAAGTCGCTGAGGCCATGAATTCGGCTGTCACAATGTCGGAGGCAGAGAAGCATTTGCGCCACGAGAAGCATTACAAGTACATAAGCTCTCATGATGTGGCTTACTGGGCAAGGAGTTTTGATCAGGATTTAGATAGAGCTTGTAGGGAGCATTACTCTAAGAGGTATTGGGGTGTTGGATTGGGCTTGGGGTTCAGAATTGTTGCTTTGGATCCTACCTTTAGGAAGCTCTCTGTGGATCACATTGCCTCTGCATATAGAGATACACACAGTCGATTGATCCTTTTGGACTACGATGGCACCATGATGCCGCAGGCGACAATCAAGACTCCGAGCAAGGAAGTTATTACTGTCTTGAATTATTTATGCAGTGATCCTGAAAACATGGTGTTCATTGTGAGCGGCAGGGATAAGGATTGCTTGAGCAAGTGGTTTTCTCCATGTGAGAAATTGGGTCTCTCTGCTGAGCACGGTTACTTCACTAGGTGGACCAAGGATTCTCCTTGGGAGACTTGCGGATTGACGACCGATTTTGAATGGAAAATGATTGCAGAACCTGTGATGGCGCTTTATACTGAAGCAACTGATGGTTCCTTCATTGAACATAAAGAAAGTGCAATGGTTTGGCACCATCAAGAAGCAGATCCTTATTTTGGATCATGCCAAGCAAAAGAGCTTCTTGATCACCTGGAGAGTGTGCTTGCCAATGAGCCAGTAGGGGTTATAAGGGGACAACATATAGTTGAAGTTAAACCTCAGGGTGTGAGCAAGGGTAAAGTGGTGGAAGACCTTATCTCAATCATGCGAAGTAAGGGGAAGTCACCAGATTTTCTACTGTGCATAGGAGATGATCGCTCAGATGAAGATATGTTTGAAAGCATTGCTCTTTCAGTATCTAATCCAGCTCTTTCCACCATAATATCAAAAGTGTTTGCATGCACTGTTGGACAAAAACCAAGTATGGCCGAATACTATTTGGATGATACTAGCGAAGTAATCAAGTTACTTGAAGGACTTGCAACTGCAGCAGGACCTTCTGCGTCCATAATTTATCAGGATTTGTGA 2568 0.491 MLSRSCLGLLNLVSVDDYQTLGGRVPRLVTTAAGDVPELYIDGMENPGSDDAVSPARRERRIVVANQLPIRAFREGRKWRFEWDRDSLVLQLKDGFPSDVEVLYVGSLKAEIEGCKQEEVAQLLLEKFRCVPTFIPSEIHNKFYHGFCKHYLWPLFHYMLPMSPSQGARFDREQWKAYVLANRIFAEKVTEIINPDEDYVWVHDYHLMILPTFLRKRFHRVKLGFFLHNTFPSSEIYRTLPVREDILRAFLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTVKILPAGIHMGLLESVLSLPQTALRVKELKKEYEGKVVILGVDDMDLFKGISLKFLALGKLLEVDESLRGRVVLVQILNAARSRGKDIQDVKNESEAIAREINEKYSQPGYQPIVYINGPISTQEKAAYYAVSECCVVNAVRDGMNLVPYEYTVCRQGSFALDKALGVEGEDKKTLKQSVIIVSEFIGCSPSLSGAIRVNPWNIDEVAEAMNSAVTMSEAEKHLRHEKHYKYISSHDVAYWARSFDQDLDRACREHYSKRYWGVGLGLGFRIVALDPTFRKLSVDHIASAYRDTHSRLILLDYDGTMMPQATIKTPSKEVITVLNYLCSDPENMVFIVSGRDKDCLSKWFSPCEKLGLSAEHGYFTRWTKDSPWETCGLTTDFEWKMIAEPVMALYTEATDGSFIEHKESAMVWHHQEADPYFGSCQAKELLDHLESVLANEPVGVIRGQHIVEVKPQGVSKGKVVEDLISIMRSKGKSPDFLLCIGDDRSDEDMFESIALSVSNPALSTIISKVFACTVGQKPSMAEYYLDDTSEVIKLLEGLATAAGPSASIIYQDL* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0655 855 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Gso13g0655 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 845 IPR001830 GO:0003824|GO:0005992
Gso13g0655 855 SUPERFAMILY HAD-like 593 841 IPR036412 -
Gso13g0655 855 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 594 799 IPR006379 -
Gso13g0655 855 Gene3D - 592 707 IPR023214 -
Gso13g0655 855 Gene3D - 721 848 IPR023214 -
Gso13g0655 855 Pfam Trehalose-phosphatase 596 831 IPR003337 GO:0003824|GO:0005992
Gso13g0655 855 TIGRFAM T6PP: trehalose-phosphatase 592 841 IPR003337 GO:0003824|GO:0005992
Gso13g0655 855 Gene3D Glycogen Phosphorylase B; 51 311 - -
Gso13g0655 855 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 845 - -
Gso13g0655 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 550 - -
Gso13g0655 855 Pfam Glycosyltransferase family 20 60 546 IPR001830 GO:0003824|GO:0005992
Gso13g0655 855 CDD HAD_TPP 594 835 - -
Gso13g0655 855 Gene3D Glycogen Phosphorylase B; 312 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0655 Gso-Chr13 20679239 20682592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0655 10 847 Trehalose Biosynthesis Gene Families AT2G18700 67.929 0.0 1182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0655 K16055 - gmx:100810498 1647.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0655 13 20679239 20682592 Gso17g0572 17 5300590 5304119 GST