Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0631 ATGTCTGATTCACTATCAGTTAATGTTGATTCTTCAATTAAGTCTGAATTCTCCACTGATGAAGGACACAAAACTATCCATGAGACTAAACACTTTCCATCTAACATCCAAAAGGCTATTGCTGAGGTTGTTAGTACATACATTCTTATATTTGCAGGATGTGGAGCAGCTCTTGTAAACGAGAAGTTGCCACTTACAATAGTAGGCATAGCAATTGTTTCGGGTCTAGCTCTCACGGTGGCTACATATTCTATTGGCCATGTCTTTGGTGGCCATTTCAATCCTGTAGTCCCAATTGCTTTGGTTGCTGTCAGAAAAGTTCAATTTAAACTTGTGCCTATTTATGTGTTGTGCCAGATGATGGGTGCTACACTGGTACCTCTCACCCTCAAAGTGTTGCATCATGACAAGGTGGATGTTGGAGTAACGGTGACTAAATACTTGAGCTCAACTTCTCATTTAGAAGCAATAGTGTGGGAATTCATCACCGCTTCCATACTGATGCTCACCATTTGTGGTGTTGCCACTGATCACAGAGGTAGCAAAGATCTCACTGGAGTTGCCATAGGCATTTCAGTTCTGATTAATGTCATCATTGCCGGGCCTATTACTGGAGCTTCAATGAATCCAGCAAGGAGTTTAGGTCCAGCTATCGTCTCTGGTGATTACAAAAACATTTGGGTTTATATCGTAAGCCCAATTCTAGGAGCAGTCTCAGCAAGTACACTTTACAAATTCCTGGAAGTAACCCAACCAGTTAAACCAAAATCATGTGATTGTAACATATGCAGTCATAATCATTTACCACTCTAA 813 0.4084 MSDSLSVNVDSSIKSEFSTDEGHKTIHETKHFPSNIQKAIAEVVSTYILIFAGCGAALVNEKLPLTIVGIAIVSGLALTVATYSIGHVFGGHFNPVVPIALVAVRKVQFKLVPIYVLCQMMGATLVPLTLKVLHHDKVDVGVTVTKYLSSTSHLEAIVWEFITASILMLTICGVATDHRGSKDLTGVAIGISVLINVIIAGPITGASMNPARSLGPAIVSGDYKNIWVYIVSPILGAVSASTLYKFLEVTQPVKPKSCDCNICSHNHLPL* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0631 270 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso13g0631 270 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso13g0631 270 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso13g0631 270 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso13g0631 270 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso13g0631 270 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso13g0631 270 PANTHER MAJOR INTRINSIC PROTEIN 1 268 - -
Gso13g0631 270 SUPERFAMILY Aquaporin-like 31 249 IPR023271 -
Gso13g0631 270 Pfam Major intrinsic protein 34 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso13g0631 270 Gene3D Glycerol uptake facilitator protein. 3 257 IPR023271 -
Gso13g0631 270 PANTHER AQUAPORIN NIP2-1 1 268 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0631 Gso-Chr13 20322905 20329957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0631 37 254 Major Intrinsic Protein MIP AT5G37820 44.395 1.73e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0631 K09874 - gmx:100798380 476.092