Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0606 ATGTCCTCAATGGGTGATCCAGCTGATGAAAATCTTGAAAGGAAAGAGATGGACGTGAGAAATTTGTCATCTTCACATGGCCAAGAACCATATGTCCACAAGGTTGGAATTCCTCCAAGACAAAACCTTTTCAAGGAATTCCAATCCACTGTAAAAGAAACACTTTTCGCGGATGATCCTCTAAGGTCCTTCAAGGATCAATCTAAGTCCCGAAAGCTCATCCTCGGAATTGAAGCCATTTTCCCCATAGTTAGCTGGGGGAGAACTTATAATCTCACAAAATTTAGAGGGGATCTTATTGCTGGTCTAACTATCGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAGCTTGCAAATTTAGATCCACAGTATGGATTGTACTCCAGCTTTATTCCACCACTGATTTATGCTGTCATGGGTAGTTCTCGTGACATTGCAATAGGACCGGTGGCAGTGGTTTCTCTCTTGTTGGGGACTTTACTTCAGAGCGAGATTGATCCCATTGCAAATCCAGTAGACTATCGACGACTTGCATTTACTGCCACTTTCTTTGCTGGGATTACTCAAGCAACGCTAGGGGTTTTAAGGTTAGGATTTTTGATTGATTTCCTATCTCATGCTGCAATTGTCGGTTTTATGGGGGGAGCTGCCATCACAATTGCCCTTCAACAGCTCAAGGGCTTCCTTGGGATTGCAAAGTTTTCAAAGAAAACTGATGTTATCTCTGTGATGCATTCAGTGCTGTCATCAGCCCATCATGGATGGAATTGGCAAACTATAGTAATTGGAGCTTCCTTTCTGGGTTTTCTTCTGTTTGCTAAGTATATTGGAAAGAAGAACCCGAAATTCTTTTGGGTGCCAGCAATTGCCCCGTTGGTATCTGTTGTTCTCTCTACCCTTTTTGTATTCTTAACCCGAGCAGACAAGCATGGTGTTGCAATTGTAAAACATTTAGAGAAAGGGCTCAATCCTTCATCTGTCAAGGAAATTTATTTTACTGGTGACTACCTTGGGAAAGGTTTCAGAATTGGCATCGTGGCAGGCATGATAGCATTGACTGAAGCCACAGCAATTGGAAGAACATTTGCTTCTATGAAGGATTATCAACTGGATGGAAACAAAGAAATGGTGGCATTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCTTGTTATGTAGCAACTGGTTCTTTCTCTCGTTCAGCAGTAAATTTCATGGCTGGCTGTGAAACCGCAGTATCTAATATTGTCATGTCTGTTGTGGTGTTCTTAACCTTACAATTCCTCACGCCTCTTTTCAAATACACTCCAAATGCCATTCTTGCTACAATCATCATTTCTGCTGTCATCAACCTTGTGGACTATAAGGCAGCAATTTTGATATGGAAGATTGATAAATTTGACTTTGTTGCATGCATGGGAGCATTTTTTGGGGTTGTTTTTGCCTCGGTTGAGATAGGACTTTTAATTGCAGTCTCTATCTCCTTTGCAAAGATTCTATTACAAGTCACAAGGCCACGAACTGCAATTCTGGGGAAAATCCCTAGGACTACTGTCTACAGAAACATCCAACAATACCCTGAAGCCACAAGGGTTCCTGGTGTACTTATTATTAGAGTTGATTCTGCAATATACTTTTCCAACTCCAACTATGTTAAAGAAAGGATATTAAGATGGCTGGTGGATGAGGAAGAACTAGTGAAAGGAGACTACCAAACAAGAATCCAATTTTTGATGGTCGAGATGTCACCCGTTACCGACATTGATACCAGCGGCATCCATACCCTCGAAGAGTTATTTAGAAGTCTTCAGAAGAGAAATGTTCAGCTTGTTCTGGCAAATCCTGGCCCAATAGTAATAGACAAGCTCCACACATCAAACTTTGCTGCTTTGCTTGGAGAGGACAAGATCTTCCTCACTGTTGCAGAGGCTGTTGCATACTGTTCACCAAAGCTGGCTGAAGAACCTTGA 1977 0.4173 MSSMGDPADENLERKEMDVRNLSSSHGQEPYVHKVGIPPRQNLFKEFQSTVKETLFADDPLRSFKDQSKSRKLILGIEAIFPIVSWGRTYNLTKFRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFIPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQSEIDPIANPVDYRRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIAKFSKKTDVISVMHSVLSSAHHGWNWQTIVIGASFLGFLLFAKYIGKKNPKFFWVPAIAPLVSVVLSTLFVFLTRADKHGVAIVKHLEKGLNPSSVKEIYFTGDYLGKGFRIGIVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCETAVSNIVMSVVVFLTLQFLTPLFKYTPNAILATIIISAVINLVDYKAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATRVPGVLIIRVDSAIYFSNSNYVKERILRWLVDEEELVKGDYQTRIQFLMVEMSPVTDIDTSGIHTLEELFRSLQKRNVQLVLANPGPIVIDKLHTSNFAALLGEDKIFLTVAEAVAYCSPKLAEEP* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0606 658 PANTHER SULFATE TRANSPORTER 18 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso13g0606 658 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 18 658 - -
Gso13g0606 658 MobiDBLite consensus disorder prediction 1 31 - -
Gso13g0606 658 Pfam STAS domain 528 646 IPR002645 -
Gso13g0606 658 Gene3D STAS domain 507 654 IPR036513 -
Gso13g0606 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Gso13g0606 658 TIGRFAM sulP: sulfate permease 82 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso13g0606 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Gso13g0606 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Gso13g0606 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Gso13g0606 658 MobiDBLite consensus disorder prediction 8 22 - -
Gso13g0606 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0606 Gso-Chr13 19889352 19894520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0606 1 657 Inorganic Solute Cotransporters AT1G22150 77.169 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0606 K17470 - gmx:100797668 1276.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1426 14 44300630 44307144 Gso13g0606 13 19889352 19894520 GST
Gso13g0606 13 19889352 19894520 Gso6g0895 6 8550602 8555400 PCT
Gso6g0895 6 8550602 8555400 Gso13g0606 13 19889352 19894520 PCT