Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0602 ATGAAGAAGGCCACAAGAATCGTTTCAATCTTCGTGATCTCGATGCTCTGTTTCCAAGAACTCATCCACGTTTCTTCGTCACCTTTCTTGTACGCACACCAGGTCTATGAGGAATCTTCTGGTGGAAGAAATCTTAAACAGGAACAGGAACAGGAACAGAAACATGCTCAAGAAGTGCATTGCTCCAGGGAGAGAAGTAGGGCAGCTCGGAAAGTGATAGAGGAGATCCATGAATATTGTTTAAAACATGTGCTAATTTGGAAACACGTAGTTTCAGTATATCAGTATTTGACACCATTTATGGAACGAGAAAACTACCAACTTTCAAGTAAGTGCAAACTTCACCCTGAAAATGATATATTCACGGATCAGGAAGAGCATAAAATTTACATAGATCGACATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTTCGTGAAGAAAAATTTCTTGATCAGCATTTTGACAGCAGACACTACAATTTTCTGAATCTAAGTCATGGTAAGTGCTTGGGTGATTTATGTGGCGCATTGCATTGTGATGCTGTGATGAATTTCAAATCCTCTAGAAGCAAGTGCAATCCGGCAGCTGCTGCAAGAAACCGTCATCTATGCGAGAATCTTGCTGACAACTGTTTTCCTATAAGTGAGGGTCCATCAGCAGGCCGCCTTCATGAATTGTTTCTGCACCAATTTTGTGATGCTCACACTTGCTCAGGGAAACATAAACCCTTCTCTAGAGGAGGCAAGGATCAAAGTAGTTTCTTCCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGGTACAAAGTGATGTGAAGAGTCGAACCCAAGAGCTTCGTCGGATCTCAAAAGCTGGATGGAAATCAAAACCATCATGA 909 0.4169 MKKATRIVSIFVISMLCFQELIHVSSSPFLYAHQVYEESSGGRNLKQEQEQEQKHAQEVHCSRERSRAARKVIEEIHEYCLKHVLIWKHVVSVYQYLTPFMERENYQLSSKCKLHPENDIFTDQEEHKIYIDRHEWRCGYCKKSFREEKFLDQHFDSRHYNFLNLSHGKCLGDLCGALHCDAVMNFKSSRSKCNPAAAARNRHLCENLADNCFPISEGPSAGRLHELFLHQFCDAHTCSGKHKPFSRGGKDQSSFFRLAAGALILVLLPVFYLFLYLVQSDVKSRTQELRRISKAGWKSKPS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0602 302 ProSitePatterns Zinc finger C2H2 type domain signature. 138 159 IPR013087 -
Gso13g0602 302 PANTHER ZINC FINGER PROTEIN-RELATED 11 302 - -
Gso13g0602 302 ProSiteProfiles Zinc finger C2H2 type domain profile. 136 159 IPR013087 -
Gso13g0602 302 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0602 Gso-Chr13 19778425 19783371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0602 34 302 C2H2 Transcription Factor Family AT5G63280 55.390 2.64e-100 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso13g0602 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0602 - - gmx:100780668 613.609