Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0587 ATGGCGGCTTCAGTCGACAACCGTCAATACGGCACCCACATAAACGCCGTCGTTCGCGCTTGCGGCCCAGACTTCAATACCCCTCTCCCGTCGGATTTCGATTTGGACTCATCCAGCGACGACGAAGACCAAAACGACGACGCTTCGTATCTCAAGGAGTTGATACAAAAAGCGAACGCGGAAACCGAGGCGTCGCTGTTGGACCCGCGAGACGAGGGAACCGCGGACCAGTGGATCCCGCGGAACGCCTCCATGGTGCGGCTCACAGGGAAGCACCCCTTCAACGCGGAGGCCCCACTCCCCCGCCTTATGCACCACGGCTTCATCACCCCATCGCCACTCCACTACGTCCGCAACCACGGTCCAGTTCCCAAGATCAAATGGGATGAATGGACCGTGGAAGTGACTGGGTTGGTCAAACGATCAACCCACTTCACCATGGAGAAACTTATGAGGGAATTCCCTCACCGCGAGTTTCCCGCCACACTAGTGTGTGCGGGAAATCGGCGCAAAGAGCATAACATGGTGAAGCAGAGCATCGGCTTCAACTGGGGTGCCGCCGGGGCCTCCACCTCCGTGTGGCGGGGGGTCCCGCTGCGTCATGTGCTGAAACGCTGTGGGATCCTCGCCCGTATGAAGGGCGCCATGTACGTGTCCTTCGAGGGCGCCGAGGATCTCCCCGGGGGCGGTGGGTCCAAGTATGGAACCAGCGTCAAGAGGGAGATGGCCATGGATCCGTCGCGTGACATCATTCTCGCGTTCATGCAAAACGGCGAGCCGTTGGCGCCGGATCATGGATTTCCCGTGCGCATGATTATTCCGGGGTTCATCGGTGGAAGAATGGTGAAATGGCTCAAACGCATTGTCGTTACTGAGCATGAGTGCGATAGTCATTATCATTATAAGGATAATAGAGTACTCCCTTCCCATGTTGATGCAGAACTTGCTAATGACGAAGGTTGGTGGTACAAGCCAGAATACATCATCAACGAGTTGAATATAAACTCAGTGATAACTACGCCTTGTCACGAGGAGATCTTGCCCATCAACTCATGGACTACACAGAGGCCTTACGTAATCAGAGGCTATGCATATTCCGGTGGTGGAAGGAAAGTGACACGTGTGGAGGTAACACTTGATGGTGGAGAAACATGGCACGTGTGCACATTGGACCATACTGAGAAACCTAACAAATATGGCAAGTATTGGTGCTGGTGCTTCTGGTCTTTGGAGGTGGAGGTGCTTGACCTACTTGGGGCCAAGGAGATTGCGGTTCGAGCTTGGGATGAAGGTCTCAACACTCAGCCTGAACACCTCATTTGGAATGTTATGGGCATGATGAATAACTGCTGGTTCAGAGTGAAAACAAATGTGTGCAAGCCCCACAAGGGTGAGATTGGCATAGTGTTTGAGCATCCAACCCAACCAGGCAACCAACCCGGTGGCTGGATGGCAAAGGAAAAACATTTGGAAAAATCACAAAAGCCAAAACCAACCCTAAAAAAGAGTGTCTCCACACCATTCATGAACACTTCCTCAAAAATGTTCTCCATCTCCGAAGTGAAAAAACATTCCAACCCTGACTCTGCTTGGATCATTGTCCACGGTCACGTCTATGATTGCACCCGCTTCCTCAAAGATCACCCCGGTGGTACTGACAGCATCCTCATCAATGCTGGCACCGACTGCACCGAAGAGTTTGACGCCATCCATTCTGACAAAGCAAAAAAATTGCTTGAAGATTACCGAATCGGGGAGCTCATCACCACTGGCTACACCTCAGACTCATCGCCCAACAACTCCGTGCATGGCAATTCCGAATTCACTCATTTGGCCCCTATTAAGGAATCTACAACACCACCATCACGTAGTGTGGCTCTCAACCCACGCGAGAAAATCCCATGCAAGCTCGTGTCAAAGACCTCCATTTCTCATGACGCGAGGCTATTCCGTTTTGCATTACCCTCAGAGGACCAACTCTTGGGATTATCCGTGGGGAAACACATTTTCTTGTGTGCCACCATCGACGGCAAGCTATGCATGCGAGCCTACACTCCAACAAGTAGTGTGGATGAAGTGGGTTTCTTTGATCTACTCATCAAGGTGTACTTCAAAGGTGTGCATCCCAAGTTTCCAAATGGAGGACTCATGTCTCAACATTTGGACTCTCTACCCATTGGATCCATGTTGGACGTGAAGGGCCCATTAGGTCACATAGAATACACCGGAAGAGGCAACTTCATGGTTCATGGAAAACCAAGATTCGCCAAGAGGTTGGCCATGTTGGCTGGTGGAACTGGGATCACGCCCATTTACCAAGTGGCGCAAGCGATTTTGAAGGACCCAGAGGACCACACCGAAATGCATGTAGTGTATGCGAATCGCACAGAGGATGATATATTACTGAGGGAGGAGTTGGATGAGTGGGCGAAGATACATAATGACCGGTTCAAGCTATGGTACGTGGTGGAAATCGCAAAGGAAGGGTGGAAATACAGTGTAGGGTTCATCACAGAGAGTATCACGAGGGAGCACCTTCCAAAAGCGTCGAGGGATTCCTTGGCTTTGACATGTGGGCCACCACCCATGATTCAGTTTGCAGTGCAGCCTAATTTGGAGAAAATGGGATATGATATCAAGAACGATTTGCTTGTGTTTTAG 2661 0.5118 MAASVDNRQYGTHINAVVRACGPDFNTPLPSDFDLDSSSDDEDQNDDASYLKELIQKANAETEASLLDPRDEGTADQWIPRNASMVRLTGKHPFNAEAPLPRLMHHGFITPSPLHYVRNHGPVPKIKWDEWTVEVTGLVKRSTHFTMEKLMREFPHREFPATLVCAGNRRKEHNMVKQSIGFNWGAAGASTSVWRGVPLRHVLKRCGILARMKGAMYVSFEGAEDLPGGGGSKYGTSVKREMAMDPSRDIILAFMQNGEPLAPDHGFPVRMIIPGFIGGRMVKWLKRIVVTEHECDSHYHYKDNRVLPSHVDAELANDEGWWYKPEYIINELNINSVITTPCHEEILPINSWTTQRPYVIRGYAYSGGGRKVTRVEVTLDGGETWHVCTLDHTEKPNKYGKYWCWCFWSLEVEVLDLLGAKEIAVRAWDEGLNTQPEHLIWNVMGMMNNCWFRVKTNVCKPHKGEIGIVFEHPTQPGNQPGGWMAKEKHLEKSQKPKPTLKKSVSTPFMNTSSKMFSISEVKKHSNPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAIHSDKAKKLLEDYRIGELITTGYTSDSSPNNSVHGNSEFTHLAPIKESTTPPSRSVALNPREKIPCKLVSKTSISHDARLFRFALPSEDQLLGLSVGKHIFLCATIDGKLCMRAYTPTSSVDEVGFFDLLIKVYFKGVHPKFPNGGLMSQHLDSLPIGSMLDVKGPLGHIEYTGRGNFMVHGKPRFAKRLAMLAGGTGITPIYQVAQAILKDPEDHTEMHVVYANRTEDDILLREELDEWAKIHNDRFKLWYVVEIAKEGWKYSVGFITESITREHLPKASRDSLALTCGPPPMIQFAVQPNLEKMGYDIKNDLLVF* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0587 886 PRINTS Cytochrome B5 reductase signature 661 672 - -
Gso13g0587 886 PRINTS Cytochrome B5 reductase signature 682 689 - -
Gso13g0587 886 PRINTS Cytochrome B5 reductase signature 727 741 - -
Gso13g0587 886 PRINTS Cytochrome B5 reductase signature 760 779 - -
Gso13g0587 886 PRINTS Cytochrome B5 reductase signature 798 809 - -
Gso13g0587 886 PRINTS Cytochrome B5 reductase signature 854 862 - -
Gso13g0587 886 PANTHER NITRATE REDUCTASE [NADH] 2 43 886 - -
Gso13g0587 886 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 730 880 IPR039261 -
Gso13g0587 886 Pfam Oxidoreductase NAD-binding domain 761 868 IPR001433 GO:0016491
Gso13g0587 886 SMART Cyt_b5_2 516 588 IPR001199 -
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 86 100 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 108 124 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 161 172 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 172 184 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 187 202 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 245 261 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 262 275 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 278 291 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 329 341 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 360 374 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 374 386 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 401 411 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 426 438 IPR008335 GO:0016491
Gso13g0587 886 PRINTS Eukaryotic molybdopterin domain signature 439 452 IPR008335 GO:0016491
Gso13g0587 886 PANTHER NADH-CYTOCHROME B5 REDUCTASE 43 886 IPR001834 GO:0016491
Gso13g0587 886 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 68 329 IPR036374 -
Gso13g0587 886 SUPERFAMILY Riboflavin synthase domain-like 623 742 IPR017938 -
Gso13g0587 886 Pfam Cytochrome b5-like Heme/Steroid binding domain 519 587 IPR001199 -
Gso13g0587 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 547 557 IPR001709 GO:0016491
Gso13g0587 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 682 689 IPR001709 GO:0016491
Gso13g0587 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 760 779 IPR001709 GO:0016491
Gso13g0587 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 786 795 IPR001709 GO:0016491
Gso13g0587 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 798 809 IPR001709 GO:0016491
Gso13g0587 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 830 846 IPR001709 GO:0016491
Gso13g0587 886 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 854 862 IPR001709 GO:0016491
Gso13g0587 886 CDD eukary_NR_Moco 71 456 - -
Gso13g0587 886 Pfam Oxidoreductase molybdopterin binding domain 120 299 IPR000572 -
Gso13g0587 886 SUPERFAMILY E set domains 331 458 IPR014756 -
Gso13g0587 886 Pfam Mo-co oxidoreductase dimerisation domain 327 458 IPR005066 GO:0016491|GO:0030151
Gso13g0587 886 Gene3D Translation factors 622 736 - -
Gso13g0587 886 Pfam Oxidoreductase FAD-binding domain 635 741 IPR008333 -
Gso13g0587 886 PIRSF Nitr_rd_NADH 7 885 IPR012137 GO:0006809|GO:0042128|GO:0050464
Gso13g0587 886 CDD cyt_b5_reduct_like 635 881 - -
Gso13g0587 886 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 513 588 IPR001199 -
Gso13g0587 886 Gene3D - 508 590 IPR036400 -
Gso13g0587 886 Gene3D - 331 506 - -
Gso13g0587 886 Gene3D - 737 886 IPR039261 -
Gso13g0587 886 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 630 742 IPR017927 GO:0016491
Gso13g0587 886 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 511 592 IPR036400 -
Gso13g0587 886 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 544 551 IPR018506 GO:0020037
Gso13g0587 886 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 137 172 IPR022407 GO:0043546
Gso13g0587 886 PRINTS Cytochrome B5 signature 538 548 IPR001199 -
Gso13g0587 886 PRINTS Cytochrome B5 signature 548 562 IPR001199 -
Gso13g0587 886 PRINTS Cytochrome B5 signature 563 570 IPR001199 -
Gso13g0587 886 PRINTS Cytochrome B5 signature 575 587 IPR001199 -
Gso13g0587 886 Gene3D - 70 320 IPR036374 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0587 Gso-Chr13 19402352 19407295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0587 618 877 NADPH P450 reductases AT5G17770 39.695 7.70e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0587 K10534 - gmx:100813471 1818.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1390 14 42939207 42944468 Gso13g0587 13 19402352 19407295 GST